Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdx1P18111 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdx1P18111 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdx1P18111 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cdx1P18111 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Cdx1P18111 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdx1P18111 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdx1P18111 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cdx1P18111 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdx1P18111 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdx1P18111 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdx1P18111 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdx1P18111 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdx1P18111 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdx1P18111 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdx1P18111 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdx1P18111 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Cdx1P18111 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdx1P18111 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cdx1P18111 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdx1P18111 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdx1P18111 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdx1P18111 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdx1P18111 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdx1P18111 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdx1P18111 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx1P18111 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx1P18111 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Cdx1P18111 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.32■□□□□ 0.36
Cdx1P18111 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx1P18111 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx1P18111 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx1P18111 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cdx1P18111 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdx1P18111 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx1P18111 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx1P18111 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx1P18111 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx1P18111 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx1P18111 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx1P18111 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cdx1P18111 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx1P18111 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx1P18111 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx1P18111 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdx1P18111 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdx1P18111 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cdx1P18111 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdx1P18111 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdx1P18111 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdx1P18111 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.3■□□□□ 0.36
Cdx1P18111 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdx1P18111 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Cdx1P18111 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdx1P18111 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.29■□□□□ 0.36
Cdx1P18111 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdx1P18111 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.29■□□□□ 0.36
Cdx1P18111 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdx1P18111 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdx1P18111 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.29■□□□□ 0.36
Cdx1P18111 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdx1P18111 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdx1P18111 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.28■□□□□ 0.36
Cdx1P18111 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdx1P18111 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdx1P18111 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdx1P18111 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdx1P18111 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdx1P18111 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdx1P18111 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdx1P18111 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdx1P18111 Gm11175-201ENSMUST00000116172 543 ntBASIC17.27■□□□□ 0.36
Cdx1P18111 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdx1P18111 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cdx1P18111 Particl-201ENSMUST00000205370 1560 ntBASIC17.27■□□□□ 0.35
Cdx1P18111 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdx1P18111 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdx1P18111 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdx1P18111 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdx1P18111 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdx1P18111 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdx1P18111 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdx1P18111 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cdx1P18111 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdx1P18111 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cdx1P18111 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdx1P18111 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdx1P18111 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdx1P18111 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.25■□□□□ 0.35
Cdx1P18111 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdx1P18111 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdx1P18111 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdx1P18111 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdx1P18111 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Cdx1P18111 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdx1P18111 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdx1P18111 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cdx1P18111 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdx1P18111 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdx1P18111 Gm6311-201ENSMUST00000073790 878 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms