Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.18■□□□□ 0.5
Trav12-1A0N8R1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.18■□□□□ 0.5
Trav12-1A0N8R1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12-1A0N8R1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12-1A0N8R1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav12-1A0N8R1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12-1A0N8R1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12-1A0N8R1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12-1A0N8R1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12-1A0N8R1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12-1A0N8R1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12-1A0N8R1 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.17■□□□□ 0.5
Trav12-1A0N8R1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12-1A0N8R1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12-1A0N8R1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12-1A0N8R1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12-1A0N8R1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12-1A0N8R1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12-1A0N8R1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12-1A0N8R1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12-1A0N8R1 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.17■□□□□ 0.5
Trav12-1A0N8R1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12-1A0N8R1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12-1A0N8R1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.16■□□□□ 0.5
Trav12-1A0N8R1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12-1A0N8R1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trav12-1A0N8R1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12-1A0N8R1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trav12-1A0N8R1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.16■□□□□ 0.5
Trav12-1A0N8R1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12-1A0N8R1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Trav12-1A0N8R1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12-1A0N8R1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12-1A0N8R1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12-1A0N8R1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12-1A0N8R1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12-1A0N8R1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12-1A0N8R1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12-1A0N8R1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12-1A0N8R1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12-1A0N8R1 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.14■□□□□ 0.49
Trav12-1A0N8R1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
Trav12-1A0N8R1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12-1A0N8R1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trav12-1A0N8R1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav12-1A0N8R1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12-1A0N8R1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12-1A0N8R1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12-1A0N8R1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12-1A0N8R1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12-1A0N8R1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12-1A0N8R1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.12■□□□□ 0.49
Trav12-1A0N8R1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12-1A0N8R1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.12■□□□□ 0.49
Trav12-1A0N8R1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.12■□□□□ 0.49
Trav12-1A0N8R1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12-1A0N8R1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12-1A0N8R1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12-1A0N8R1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12-1A0N8R1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trav12-1A0N8R1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12-1A0N8R1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Trav12-1A0N8R1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Trav12-1A0N8R1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12-1A0N8R1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12-1A0N8R1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12-1A0N8R1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12-1A0N8R1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav12-1A0N8R1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12-1A0N8R1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12-1A0N8R1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12-1A0N8R1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav12-1A0N8R1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav12-1A0N8R1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav12-1A0N8R1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav12-1A0N8R1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav12-1A0N8R1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav12-1A0N8R1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav12-1A0N8R1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav12-1A0N8R1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav12-1A0N8R1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav12-1A0N8R1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav12-1A0N8R1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav12-1A0N8R1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trav12-1A0N8R1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav12-1A0N8R1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav12-1A0N8R1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav12-1A0N8R1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav12-1A0N8R1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav12-1A0N8R1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav12-1A0N8R1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav12-1A0N8R1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav12-1A0N8R1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav12-1A0N8R1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav12-1A0N8R1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav12-1A0N8R1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
Trav12-1A0N8R1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav12-1A0N8R1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.06■□□□□ 0.48
Trav12-1A0N8R1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav12-1A0N8R1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms