Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3880A0A1B0GSB3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3880A0A1B0GSB3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Gm3880A0A1B0GSB3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3880A0A1B0GSB3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Gm3880A0A1B0GSB3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3880A0A1B0GSB3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3880A0A1B0GSB3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3880A0A1B0GSB3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3880A0A1B0GSB3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Gm3880A0A1B0GSB3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3880A0A1B0GSB3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Gm3880A0A1B0GSB3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3880A0A1B0GSB3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3880A0A1B0GSB3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Gm3880A0A1B0GSB3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3880A0A1B0GSB3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Gm3880A0A1B0GSB3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3880A0A1B0GSB3 Gm6934-201ENSMUST00000194780 1905 ntBASIC10.92□□□□□ -0.66
Gm3880A0A1B0GSB3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC10.91□□□□□ -0.66
Gm3880A0A1B0GSB3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm3880A0A1B0GSB3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm3880A0A1B0GSB3 Gm23366-201ENSMUST00000175022 89 ntBASIC10.91□□□□□ -0.66
Gm3880A0A1B0GSB3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Gm3880A0A1B0GSB3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm3880A0A1B0GSB3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm3880A0A1B0GSB3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Gm3880A0A1B0GSB3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Gm3880A0A1B0GSB3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC10.9□□□□□ -0.66
Gm3880A0A1B0GSB3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Gm3880A0A1B0GSB3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm3880A0A1B0GSB3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm3880A0A1B0GSB3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm3880A0A1B0GSB3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm3880A0A1B0GSB3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC10.9□□□□□ -0.66
Gm3880A0A1B0GSB3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm3880A0A1B0GSB3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm3880A0A1B0GSB3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm3880A0A1B0GSB3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm3880A0A1B0GSB3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Gm3880A0A1B0GSB3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm3880A0A1B0GSB3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm3880A0A1B0GSB3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm3880A0A1B0GSB3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm3880A0A1B0GSB3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Gm3880A0A1B0GSB3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm3880A0A1B0GSB3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm3880A0A1B0GSB3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm3880A0A1B0GSB3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Gm3880A0A1B0GSB3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm3880A0A1B0GSB3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC10.89□□□□□ -0.67
Gm3880A0A1B0GSB3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC10.89□□□□□ -0.67
Gm3880A0A1B0GSB3 Hsf1-207ENSMUST00000228371 2102 ntBASIC10.88□□□□□ -0.67
Gm3880A0A1B0GSB3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm3880A0A1B0GSB3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Gm3880A0A1B0GSB3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm3880A0A1B0GSB3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Gm3880A0A1B0GSB3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm3880A0A1B0GSB3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm3880A0A1B0GSB3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Gm3880A0A1B0GSB3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Gm3880A0A1B0GSB3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3880A0A1B0GSB3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC10.87□□□□□ -0.67
Gm3880A0A1B0GSB3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3880A0A1B0GSB3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3880A0A1B0GSB3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Gm3880A0A1B0GSB3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3880A0A1B0GSB3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3880A0A1B0GSB3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3880A0A1B0GSB3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Gm3880A0A1B0GSB3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3880A0A1B0GSB3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3880A0A1B0GSB3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Gm3880A0A1B0GSB3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3880A0A1B0GSB3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3880A0A1B0GSB3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3880A0A1B0GSB3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3880A0A1B0GSB3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Gm3880A0A1B0GSB3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3880A0A1B0GSB3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3880A0A1B0GSB3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3880A0A1B0GSB3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3880A0A1B0GSB3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Gm3880A0A1B0GSB3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3880A0A1B0GSB3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Gm3880A0A1B0GSB3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3880A0A1B0GSB3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3880A0A1B0GSB3 Gm32051-202ENSMUST00000197905 2385 ntBASIC10.85□□□□□ -0.67
Gm3880A0A1B0GSB3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3880A0A1B0GSB3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3880A0A1B0GSB3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3880A0A1B0GSB3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3880A0A1B0GSB3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3880A0A1B0GSB3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3880A0A1B0GSB3 Gm10616-201ENSMUST00000205285 2127 ntBASIC10.85□□□□□ -0.67
Gm3880A0A1B0GSB3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3880A0A1B0GSB3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3880A0A1B0GSB3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3880A0A1B0GSB3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3880A0A1B0GSB3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms