Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Igkv8-27A0A0G2JF28 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC13.68□□□□□ -0.22
Igkv8-27A0A0G2JF28 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv8-27A0A0G2JF28 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv8-27A0A0G2JF28 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv8-27A0A0G2JF28 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv8-27A0A0G2JF28 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv8-27A0A0G2JF28 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Igkv8-27A0A0G2JF28 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv8-27A0A0G2JF28 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv8-27A0A0G2JF28 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv8-27A0A0G2JF28 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv8-27A0A0G2JF28 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv8-27A0A0G2JF28 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv8-27A0A0G2JF28 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv8-27A0A0G2JF28 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC13.67□□□□□ -0.22
Igkv8-27A0A0G2JF28 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv8-27A0A0G2JF28 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv8-27A0A0G2JF28 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv8-27A0A0G2JF28 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv8-27A0A0G2JF28 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv8-27A0A0G2JF28 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Igkv8-27A0A0G2JF28 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv8-27A0A0G2JF28 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv8-27A0A0G2JF28 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Igkv8-27A0A0G2JF28 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Igkv8-27A0A0G2JF28 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv8-27A0A0G2JF28 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Igkv8-27A0A0G2JF28 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
Igkv8-27A0A0G2JF28 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Igkv8-27A0A0G2JF28 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv8-27A0A0G2JF28 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv8-27A0A0G2JF28 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Igkv8-27A0A0G2JF28 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv8-27A0A0G2JF28 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv8-27A0A0G2JF28 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Igkv8-27A0A0G2JF28 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC13.64□□□□□ -0.23
Igkv8-27A0A0G2JF28 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv8-27A0A0G2JF28 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Igkv8-27A0A0G2JF28 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv8-27A0A0G2JF28 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv8-27A0A0G2JF28 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv8-27A0A0G2JF28 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv8-27A0A0G2JF28 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv8-27A0A0G2JF28 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv8-27A0A0G2JF28 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv8-27A0A0G2JF28 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Igkv8-27A0A0G2JF28 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Igkv8-27A0A0G2JF28 Iqck-206ENSMUST00000208658 2891 ntBASIC13.63□□□□□ -0.23
Igkv8-27A0A0G2JF28 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv8-27A0A0G2JF28 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC13.63□□□□□ -0.23
Igkv8-27A0A0G2JF28 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv8-27A0A0G2JF28 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv8-27A0A0G2JF28 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv8-27A0A0G2JF28 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv8-27A0A0G2JF28 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv8-27A0A0G2JF28 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv8-27A0A0G2JF28 Gm10616-201ENSMUST00000205285 2127 ntBASIC13.62□□□□□ -0.23
Igkv8-27A0A0G2JF28 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Igkv8-27A0A0G2JF28 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Igkv8-27A0A0G2JF28 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv8-27A0A0G2JF28 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Igkv8-27A0A0G2JF28 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv8-27A0A0G2JF28 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv8-27A0A0G2JF28 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Igkv8-27A0A0G2JF28 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv8-27A0A0G2JF28 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv8-27A0A0G2JF28 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv8-27A0A0G2JF28 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Igkv8-27A0A0G2JF28 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Igkv8-27A0A0G2JF28 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv8-27A0A0G2JF28 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv8-27A0A0G2JF28 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv8-27A0A0G2JF28 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv8-27A0A0G2JF28 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv8-27A0A0G2JF28 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv8-27A0A0G2JF28 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv8-27A0A0G2JF28 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv8-27A0A0G2JF28 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv8-27A0A0G2JF28 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC13.6□□□□□ -0.23
Igkv8-27A0A0G2JF28 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv8-27A0A0G2JF28 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Igkv8-27A0A0G2JF28 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Igkv8-27A0A0G2JF28 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Igkv8-27A0A0G2JF28 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv8-27A0A0G2JF28 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv8-27A0A0G2JF28 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv8-27A0A0G2JF28 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv8-27A0A0G2JF28 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv8-27A0A0G2JF28 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv8-27A0A0G2JF28 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv8-27A0A0G2JF28 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Igkv8-27A0A0G2JF28 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC13.59□□□□□ -0.23
Igkv8-27A0A0G2JF28 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC13.59□□□□□ -0.23
Igkv8-27A0A0G2JF28 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv8-27A0A0G2JF28 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv8-27A0A0G2JF28 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv8-27A0A0G2JF28 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv8-27A0A0G2JF28 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Igkv8-27A0A0G2JF28 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms