Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12d-3A0A075B6A4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12d-3A0A075B6A4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12d-3A0A075B6A4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav12d-3A0A075B6A4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav12d-3A0A075B6A4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12d-3A0A075B6A4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12d-3A0A075B6A4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Trav12d-3A0A075B6A4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12d-3A0A075B6A4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trav12d-3A0A075B6A4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav12d-3A0A075B6A4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Trav12d-3A0A075B6A4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12d-3A0A075B6A4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12d-3A0A075B6A4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12d-3A0A075B6A4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12d-3A0A075B6A4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12d-3A0A075B6A4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12d-3A0A075B6A4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12d-3A0A075B6A4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav12d-3A0A075B6A4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12d-3A0A075B6A4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12d-3A0A075B6A4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12d-3A0A075B6A4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12d-3A0A075B6A4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12d-3A0A075B6A4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12d-3A0A075B6A4 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.31■□□□□ 0.2
Trav12d-3A0A075B6A4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.31■□□□□ 0.2
Trav12d-3A0A075B6A4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12d-3A0A075B6A4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12d-3A0A075B6A4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12d-3A0A075B6A4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12d-3A0A075B6A4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav12d-3A0A075B6A4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12d-3A0A075B6A4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12d-3A0A075B6A4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12d-3A0A075B6A4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12d-3A0A075B6A4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12d-3A0A075B6A4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12d-3A0A075B6A4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12d-3A0A075B6A4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Trav12d-3A0A075B6A4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav12d-3A0A075B6A4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12d-3A0A075B6A4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Trav12d-3A0A075B6A4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav12d-3A0A075B6A4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC16.28■□□□□ 0.2
Trav12d-3A0A075B6A4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12d-3A0A075B6A4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12d-3A0A075B6A4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12d-3A0A075B6A4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trav12d-3A0A075B6A4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trav12d-3A0A075B6A4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav12d-3A0A075B6A4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav12d-3A0A075B6A4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav12d-3A0A075B6A4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12d-3A0A075B6A4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12d-3A0A075B6A4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12d-3A0A075B6A4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12d-3A0A075B6A4 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.26■□□□□ 0.19
Trav12d-3A0A075B6A4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12d-3A0A075B6A4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.26■□□□□ 0.19
Trav12d-3A0A075B6A4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-3A0A075B6A4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-3A0A075B6A4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-3A0A075B6A4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-3A0A075B6A4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-3A0A075B6A4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-3A0A075B6A4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-3A0A075B6A4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-3A0A075B6A4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-3A0A075B6A4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-3A0A075B6A4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav12d-3A0A075B6A4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12d-3A0A075B6A4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12d-3A0A075B6A4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12d-3A0A075B6A4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav12d-3A0A075B6A4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12d-3A0A075B6A4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12d-3A0A075B6A4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12d-3A0A075B6A4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12d-3A0A075B6A4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12d-3A0A075B6A4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12d-3A0A075B6A4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12d-3A0A075B6A4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12d-3A0A075B6A4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav12d-3A0A075B6A4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12d-3A0A075B6A4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav12d-3A0A075B6A4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav12d-3A0A075B6A4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav12d-3A0A075B6A4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12d-3A0A075B6A4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12d-3A0A075B6A4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav12d-3A0A075B6A4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12d-3A0A075B6A4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12d-3A0A075B6A4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12d-3A0A075B6A4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12d-3A0A075B6A4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12d-3A0A075B6A4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12d-3A0A075B6A4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12d-3A0A075B6A4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 162.1 ms