Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL355306.1-201ENST00000415580 579 ntBASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 AL161645.1-201ENST00000622716 1255 ntBASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTDP1Q9Y5B0 NEFHP1-201ENST00000412845 2629 ntBASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 AC023141.5-201ENST00000458585 616 ntBASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 AC025678.2-201ENST00000562061 970 ntBASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 NOC2LP1-202ENST00000452600 2235 ntBASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 AC134043.2-201ENST00000624206 2238 ntBASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 GNAS-203ENST00000306120 1878 ntBASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTDP1Q9Y5B0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 RN7SL589P-201ENST00000481268 310 ntBASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 AP001350.2-201ENST00000625104 1094 ntBASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 FER1L4-210ENST00000615531 5998 ntBASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTDP1Q9Y5B0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 HMGA1P7-201ENST00000406908 502 ntBASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 TFAMP1-201ENST00000412727 736 ntBASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms