Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 AL031284.1-201ENST00000419297 478 ntBASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 OR7E14P-202ENST00000530490 1290 ntBASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 AL662844.1-201ENST00000546340 181 ntBASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 AC064862.7-201ENST00000604520 867 ntBASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 HLA-A-201ENST00000376802 1334 ntBASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NECTIN3Q9NQS3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 AL049840.3-201ENST00000602669 611 ntBASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NECTIN3Q9NQS3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 PCDHA1-201ENST00000378133 2726 ntBASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 AC079776.4-201ENST00000511039 504 ntBASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 AP001005.1-201ENST00000571755 1248 ntBASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.31■□□□□ 0.2
NECTIN3Q9NQS3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms