Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGB4Q8WW32 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGB4Q8WW32 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGB4Q8WW32 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGB4Q8WW32 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGB4Q8WW32 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGB4Q8WW32 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 AC236430.1-201ENST00000402231 743 ntBASIC16.96■□□□□ 0.31
HMGB4Q8WW32 HCG4-201ENST00000418983 998 ntBASIC16.96■□□□□ 0.31
HMGB4Q8WW32 SPDYE7P-202ENST00000420373 878 ntBASIC16.96■□□□□ 0.31
HMGB4Q8WW32 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 SPDYE14P-201ENST00000442619 822 ntBASIC16.96■□□□□ 0.31
HMGB4Q8WW32 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.96■□□□□ 0.31
HMGB4Q8WW32 AC140878.1-201ENST00000565277 250 ntBASIC16.96■□□□□ 0.31
HMGB4Q8WW32 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 AL031055.1-201ENST00000606362 631 ntBASIC16.96■□□□□ 0.31
HMGB4Q8WW32 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.96■□□□□ 0.31
HMGB4Q8WW32 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGB4Q8WW32 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HMGB4Q8WW32 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HMGB4Q8WW32 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HMGB4Q8WW32 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
HMGB4Q8WW32 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HMGB4Q8WW32 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 TSPY16P-201ENST00000449843 468 ntBASIC16.95■□□□□ 0.3
HMGB4Q8WW32 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGB4Q8WW32 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 SLC22A20-204ENST00000530038 1673 ntBASIC16.94■□□□□ 0.3
HMGB4Q8WW32 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGB4Q8WW32 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms