Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.03■□□□□ 0.32
CHD5Q8TDI0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 TFAMP1-201ENST00000412727 736 ntBASIC17.03■□□□□ 0.32
CHD5Q8TDI0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 AC022145.2-201ENST00000598203 171 ntBASIC17.03■□□□□ 0.32
CHD5Q8TDI0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 AP006288.1-201ENST00000446065 395 ntBASIC17.02■□□□□ 0.32
CHD5Q8TDI0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 AC109635.5-201ENST00000533593 962 ntBASIC17.02■□□□□ 0.32
CHD5Q8TDI0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHD5Q8TDI0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHD5Q8TDI0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHD5Q8TDI0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
CHD5Q8TDI0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHD5Q8TDI0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHD5Q8TDI0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHD5Q8TDI0 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.02■□□□□ 0.31
CHD5Q8TDI0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CHD5Q8TDI0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHD5Q8TDI0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CHD5Q8TDI0 RARRES2P8-201ENST00000566335 367 ntBASIC17.02■□□□□ 0.31
CHD5Q8TDI0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.02■□□□□ 0.31
CHD5Q8TDI0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHD5Q8TDI0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.02■□□□□ 0.31
CHD5Q8TDI0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHD5Q8TDI0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHD5Q8TDI0 FLJ38576-201ENST00000623820 2459 ntBASIC17.01■□□□□ 0.31
CHD5Q8TDI0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.01■□□□□ 0.31
CHD5Q8TDI0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 GGT3P-204ENST00000453783 1664 ntBASIC17.01■□□□□ 0.31
CHD5Q8TDI0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 KRT18P32-201ENST00000424695 1287 ntBASIC17.01■□□□□ 0.31
CHD5Q8TDI0 AC074386.1-202ENST00000463561 864 ntBASIC17.01■□□□□ 0.31
CHD5Q8TDI0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CHD5Q8TDI0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHD5Q8TDI0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17■□□□□ 0.31
CHD5Q8TDI0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms