Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC26.15■■□□□ 1.78
CFAP43Q8NDM7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CFAP43Q8NDM7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CFAP43Q8NDM7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
CFAP43Q8NDM7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CFAP43Q8NDM7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CFAP43Q8NDM7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC26.14■■□□□ 1.78
CFAP43Q8NDM7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CFAP43Q8NDM7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC26.14■■□□□ 1.78
CFAP43Q8NDM7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC26.14■■□□□ 1.78
CFAP43Q8NDM7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC26.14■■□□□ 1.78
CFAP43Q8NDM7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC26.14■■□□□ 1.78
CFAP43Q8NDM7 AC013467.2-201ENST00000605472 835 ntBASIC26.14■■□□□ 1.78
CFAP43Q8NDM7 TEX28P1-201ENST00000613479 1221 ntBASIC26.14■■□□□ 1.78
CFAP43Q8NDM7 TEX28P2-201ENST00000617764 1221 ntBASIC26.14■■□□□ 1.78
CFAP43Q8NDM7 MIR6799-201ENST00000620297 69 ntBASIC26.14■■□□□ 1.78
CFAP43Q8NDM7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC26.14■■□□□ 1.78
CFAP43Q8NDM7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC26.14■■□□□ 1.77
CFAP43Q8NDM7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CFAP43Q8NDM7 AC092053.1-201ENST00000605787 1936 ntBASIC26.14■■□□□ 1.77
CFAP43Q8NDM7 SNX33P1-201ENST00000592116 1762 ntBASIC26.14■■□□□ 1.77
CFAP43Q8NDM7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC26.14■■□□□ 1.77
CFAP43Q8NDM7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC26.14■■□□□ 1.77
CFAP43Q8NDM7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CFAP43Q8NDM7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 AC119751.2-201ENST00000504529 210 ntBASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 RNA5-8SN1-201ENST00000610460 153 ntBASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 RNA5-8SN5-202ENST00000612463 153 ntBASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 RNA5-8SN4-201ENST00000613359 153 ntBASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 RNA5-8SN5-201ENST00000619471 153 ntBASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CFAP43Q8NDM7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms