Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.09■□□□□ 0.97
RGPD4Q7Z3J3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
RGPD4Q7Z3J3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.09■□□□□ 0.97
RGPD4Q7Z3J3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC21.09■□□□□ 0.97
RGPD4Q7Z3J3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RGPD4Q7Z3J3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RGPD4Q7Z3J3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RGPD4Q7Z3J3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RGPD4Q7Z3J3 MIR3615-201ENST00000581999 87 ntBASIC21.09■□□□□ 0.97
RGPD4Q7Z3J3 BTNL10-201ENST00000595971 695 ntBASIC21.09■□□□□ 0.97
RGPD4Q7Z3J3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RGPD4Q7Z3J3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RGPD4Q7Z3J3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RGPD4Q7Z3J3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.08■□□□□ 0.97
RGPD4Q7Z3J3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RGPD4Q7Z3J3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RGPD4Q7Z3J3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RGPD4Q7Z3J3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RGPD4Q7Z3J3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RGPD4Q7Z3J3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC21.08■□□□□ 0.97
RGPD4Q7Z3J3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC21.08■□□□□ 0.97
RGPD4Q7Z3J3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC21.08■□□□□ 0.97
RGPD4Q7Z3J3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RGPD4Q7Z3J3 AL022328.1-201ENST00000610050 478 ntBASIC21.08■□□□□ 0.97
RGPD4Q7Z3J3 AC009542.2-202ENST00000619004 1067 ntBASIC21.08■□□□□ 0.97
RGPD4Q7Z3J3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC21.08■□□□□ 0.97
RGPD4Q7Z3J3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RGPD4Q7Z3J3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RGPD4Q7Z3J3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RGPD4Q7Z3J3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RGPD4Q7Z3J3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RGPD4Q7Z3J3 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RGPD4Q7Z3J3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
RGPD4Q7Z3J3 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC21.08■□□□□ 0.96
RGPD4Q7Z3J3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 AC006538.1-201ENST00000567905 1585 ntBASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 CDC14C-201ENST00000428251 1719 ntBASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 AC025048.3-201ENST00000590609 569 ntBASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 AC005702.4-201ENST00000618393 416 ntBASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RGPD4Q7Z3J3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 CALR4P-201ENST00000431943 946 ntBASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RGPD4Q7Z3J3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RGPD4Q7Z3J3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RGPD4Q7Z3J3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RGPD4Q7Z3J3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RGPD4Q7Z3J3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RGPD4Q7Z3J3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RGPD4Q7Z3J3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RGPD4Q7Z3J3 AC007551.1-201ENST00000457394 519 ntBASIC21.05■□□□□ 0.96
RGPD4Q7Z3J3 AC068587.3-201ENST00000526613 355 ntBASIC21.05■□□□□ 0.96
RGPD4Q7Z3J3 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC21.05■□□□□ 0.96
RGPD4Q7Z3J3 AC026979.3-201ENST00000607315 403 ntBASIC21.05■□□□□ 0.96
RGPD4Q7Z3J3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC21.05■□□□□ 0.96
RGPD4Q7Z3J3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC21.05■□□□□ 0.96
RGPD4Q7Z3J3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC21.05■□□□□ 0.96
RGPD4Q7Z3J3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RGPD4Q7Z3J3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms