Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
OPHN1O60890 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
OPHN1O60890 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
OPHN1O60890 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
OPHN1O60890 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.77■□□□□ 0.44
OPHN1O60890 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
OPHN1O60890 RPS2P1-201ENST00000434010 821 ntBASIC17.77■□□□□ 0.44
OPHN1O60890 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
OPHN1O60890 AC092910.1-201ENST00000482027 1129 ntBASIC17.77■□□□□ 0.44
OPHN1O60890 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.77■□□□□ 0.44
OPHN1O60890 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.77■□□□□ 0.44
OPHN1O60890 AC021087.4-201ENST00000563761 564 ntBASIC17.77■□□□□ 0.44
OPHN1O60890 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.77■□□□□ 0.44
OPHN1O60890 AL355385.1-201ENST00000606123 409 ntBASIC17.77■□□□□ 0.44
OPHN1O60890 AD001527.2-201ENST00000622994 785 ntBASIC17.77■□□□□ 0.44
OPHN1O60890 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.77■□□□□ 0.44
OPHN1O60890 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
OPHN1O60890 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
OPHN1O60890 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
OPHN1O60890 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
OPHN1O60890 AC009336.1-201ENST00000608941 1553 ntBASIC17.77■□□□□ 0.44
OPHN1O60890 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
OPHN1O60890 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
OPHN1O60890 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
OPHN1O60890 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
OPHN1O60890 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
OPHN1O60890 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
OPHN1O60890 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
OPHN1O60890 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
OPHN1O60890 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
OPHN1O60890 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
OPHN1O60890 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
OPHN1O60890 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
OPHN1O60890 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
OPHN1O60890 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.76■□□□□ 0.43
OPHN1O60890 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
OPHN1O60890 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 AP005117.1-201ENST00000584346 1413 ntBASIC17.76■□□□□ 0.43
OPHN1O60890 AC003669.1-201ENST00000334569 611 ntBASIC17.76■□□□□ 0.43
OPHN1O60890 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.76■□□□□ 0.43
OPHN1O60890 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.76■□□□□ 0.43
OPHN1O60890 RPSAP43-201ENST00000402237 625 ntBASIC17.76■□□□□ 0.43
OPHN1O60890 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
OPHN1O60890 RPS8P6-201ENST00000426177 609 ntBASIC17.76■□□□□ 0.43
OPHN1O60890 DNAJB3-201ENST00000446806 729 ntBASIC17.76■□□□□ 0.43
OPHN1O60890 KRT18P3-201ENST00000451602 1288 ntBASIC17.76■□□□□ 0.43
OPHN1O60890 OR7E14P-202ENST00000530490 1290 ntBASIC17.76■□□□□ 0.43
OPHN1O60890 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.76■□□□□ 0.43
OPHN1O60890 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
OPHN1O60890 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.76■□□□□ 0.43
OPHN1O60890 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.76■□□□□ 0.43
OPHN1O60890 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.76■□□□□ 0.43
OPHN1O60890 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
OPHN1O60890 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 INTS4P1-201ENST00000438455 1935 ntBASIC17.76■□□□□ 0.43
OPHN1O60890 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
OPHN1O60890 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
OPHN1O60890 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
OPHN1O60890 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.76■□□□□ 0.43
OPHN1O60890 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.76■□□□□ 0.43
OPHN1O60890 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
OPHN1O60890 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
OPHN1O60890 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
OPHN1O60890 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
OPHN1O60890 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
OPHN1O60890 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPHN1O60890 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPHN1O60890 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
OPHN1O60890 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPHN1O60890 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPHN1O60890 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPHN1O60890 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPHN1O60890 GPX1P2-201ENST00000429271 606 ntBASIC17.75■□□□□ 0.43
OPHN1O60890 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.75■□□□□ 0.43
OPHN1O60890 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.75■□□□□ 0.43
OPHN1O60890 STK19B-204ENST00000512515 211 ntBASIC17.75■□□□□ 0.43
OPHN1O60890 AC034105.1-201ENST00000563488 319 ntBASIC17.75■□□□□ 0.43
OPHN1O60890 AP001160.2-201ENST00000596071 487 ntBASIC17.75■□□□□ 0.43
OPHN1O60890 Z83851.2-201ENST00000609564 659 ntBASIC17.75■□□□□ 0.43
OPHN1O60890 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.75■□□□□ 0.43
OPHN1O60890 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
OPHN1O60890 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
OPHN1O60890 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPHN1O60890 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPHN1O60890 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms