Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 AC139887.3-201ENST00000568585 713 ntBASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 KRT8P49-201ENST00000604166 1432 ntBASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 HLA-A-202ENST00000376806 1854 ntBASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP46A1Q9Y6A2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
CYP46A1Q9Y6A2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CYP46A1Q9Y6A2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
CYP46A1Q9Y6A2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CYP46A1Q9Y6A2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CYP46A1Q9Y6A2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.14■□□□□ 0.82
CYP46A1Q9Y6A2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 AKR1C7P-201ENST00000305623 895 ntBASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 SAPCD2P3-201ENST00000455031 850 ntBASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 SCARNA2-201ENST00000458748 420 ntBASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 LINC01711-201ENST00000598340 967 ntBASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CYP46A1Q9Y6A2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 LINC00895-201ENST00000629028 1637 ntBASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 AC004706.3-202ENST00000621574 984 ntBASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms