Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 AC061975.2-201ENST00000581722 295 ntBASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 AP006294.1-201ENST00000415407 339 ntBASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 INE1-201ENST00000456273 945 ntBASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 CHCHD2P3-201ENST00000603038 451 ntBASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC25.25■■□□□ 1.63
CDC42BPBQ9Y5S2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPBQ9Y5S2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
CDC42BPBQ9Y5S2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPBQ9Y5S2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC25.24■■□□□ 1.63
CDC42BPBQ9Y5S2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPBQ9Y5S2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPBQ9Y5S2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
CDC42BPBQ9Y5S2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
CDC42BPBQ9Y5S2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
CDC42BPBQ9Y5S2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
CDC42BPBQ9Y5S2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPBQ9Y5S2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPBQ9Y5S2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPBQ9Y5S2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC25.24■■□□□ 1.63
CDC42BPBQ9Y5S2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 AC008494.3-201ENST00000606615 944 ntBASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPBQ9Y5S2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CDC42BPBQ9Y5S2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC25.22■■□□□ 1.63
CDC42BPBQ9Y5S2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
CDC42BPBQ9Y5S2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
CDC42BPBQ9Y5S2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CDC42BPBQ9Y5S2 AL353779.1-201ENST00000434793 351 ntBASIC25.22■■□□□ 1.63
CDC42BPBQ9Y5S2 GNAQP1-201ENST00000444815 1067 ntBASIC25.22■■□□□ 1.63
CDC42BPBQ9Y5S2 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CDC42BPBQ9Y5S2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC25.22■■□□□ 1.63
CDC42BPBQ9Y5S2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC25.22■■□□□ 1.63
CDC42BPBQ9Y5S2 AC017083.2-201ENST00000608069 979 ntBASIC25.22■■□□□ 1.63
CDC42BPBQ9Y5S2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms