Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 SOCS2P1-201ENST00000417727 557 ntBASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 FGFR3P5-201ENST00000564496 886 ntBASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 AP003392.6-201ENST00000607709 325 ntBASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL25A1Q9BXS0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.89■□□□□ 0.3
COL25A1Q9BXS0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 CYP46A4P-201ENST00000414953 267 ntBASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 AP001505.2-201ENST00000616815 443 ntBASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 AC009084.3-201ENST00000623356 437 ntBASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 PLS3-210ENST00000626746 216 ntTSL 4 BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 AC011491.1-203ENST00000637688 543 ntBASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 KRT8P12-202ENST00000472924 1397 ntBASIC16.89■□□□□ 0.29
COL25A1Q9BXS0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 AC104982.3-201ENST00000581995 514 ntBASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms