Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NPAS1Q99742 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.51■□□□□ 0.07
NPAS1Q99742 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS1Q99742 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS1Q99742 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS1Q99742 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.51■□□□□ 0.07
NPAS1Q99742 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.51■□□□□ 0.07
NPAS1Q99742 AL590627.1-203ENST00000421194 1026 ntBASIC15.51■□□□□ 0.07
NPAS1Q99742 AP000347.1-202ENST00000435868 847 ntBASIC15.51■□□□□ 0.07
NPAS1Q99742 RNA5SP415-201ENST00000517246 115 ntBASIC15.51■□□□□ 0.07
NPAS1Q99742 UNC93B6-202ENST00000528242 690 ntBASIC15.51■□□□□ 0.07
NPAS1Q99742 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.51■□□□□ 0.07
NPAS1Q99742 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.51■□□□□ 0.07
NPAS1Q99742 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.51■□□□□ 0.07
NPAS1Q99742 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.51■□□□□ 0.07
NPAS1Q99742 AL805961.1-202ENST00000641562 540 ntBASIC15.51■□□□□ 0.07
NPAS1Q99742 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
NPAS1Q99742 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS1Q99742 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS1Q99742 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.51■□□□□ 0.07
NPAS1Q99742 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS1Q99742 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.51■□□□□ 0.07
NPAS1Q99742 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS1Q99742 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.51■□□□□ 0.07
NPAS1Q99742 PI4KAP1-204ENST00000612579 1703 ntBASIC15.51■□□□□ 0.07
NPAS1Q99742 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS1Q99742 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS1Q99742 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS1Q99742 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS1Q99742 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS1Q99742 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.5■□□□□ 0.07
NPAS1Q99742 AL118508.1-201ENST00000613502 2345 ntBASIC15.5■□□□□ 0.07
NPAS1Q99742 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS1Q99742 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS1Q99742 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS1Q99742 PAWRP1-201ENST00000451083 565 ntBASIC15.5■□□□□ 0.07
NPAS1Q99742 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS1Q99742 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.5■□□□□ 0.07
NPAS1Q99742 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS1Q99742 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.5■□□□□ 0.07
NPAS1Q99742 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.5■□□□□ 0.07
NPAS1Q99742 DUX4L17-201ENST00000557360 1267 ntBASIC15.5■□□□□ 0.07
NPAS1Q99742 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS1Q99742 TERC-201ENST00000602385 541 ntBASIC15.5■□□□□ 0.07
NPAS1Q99742 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.5■□□□□ 0.07
NPAS1Q99742 AC120114.3-201ENST00000611923 658 ntBASIC15.5■□□□□ 0.07
NPAS1Q99742 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS1Q99742 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
NPAS1Q99742 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS1Q99742 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.5■□□□□ 0.07
NPAS1Q99742 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS1Q99742 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS1Q99742 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NPAS1Q99742 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS1Q99742 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS1Q99742 AD000864.1-201ENST00000624076 2295 ntBASIC15.5■□□□□ 0.07
NPAS1Q99742 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.5■□□□□ 0.07
NPAS1Q99742 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS1Q99742 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS1Q99742 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NPAS1Q99742 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NPAS1Q99742 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
NPAS1Q99742 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NPAS1Q99742 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 AP002414.1-201ENST00000391405 1147 ntBASIC15.49■□□□□ 0.07
NPAS1Q99742 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.49■□□□□ 0.07
NPAS1Q99742 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.49■□□□□ 0.07
NPAS1Q99742 AC108073.2-201ENST00000464002 357 ntBASIC15.49■□□□□ 0.07
NPAS1Q99742 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.49■□□□□ 0.07
NPAS1Q99742 SLC25A6P2-201ENST00000497974 877 ntBASIC15.49■□□□□ 0.07
NPAS1Q99742 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 AC093909.1-201ENST00000504731 1122 ntBASIC15.49■□□□□ 0.07
NPAS1Q99742 IGHV3-65-201ENST00000523210 341 ntBASIC15.49■□□□□ 0.07
NPAS1Q99742 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.49■□□□□ 0.07
NPAS1Q99742 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.49■□□□□ 0.07
NPAS1Q99742 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.49■□□□□ 0.07
NPAS1Q99742 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.49■□□□□ 0.07
NPAS1Q99742 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.49■□□□□ 0.07
NPAS1Q99742 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.49■□□□□ 0.07
NPAS1Q99742 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.49■□□□□ 0.07
NPAS1Q99742 MIR1199-201ENST00000621445 119 ntBASIC15.49■□□□□ 0.07
NPAS1Q99742 AC004790.2-201ENST00000623588 572 ntBASIC15.49■□□□□ 0.07
NPAS1Q99742 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NPAS1Q99742 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS1Q99742 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms