Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB3IL1Q8TBN0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.02■□□□□ 0.31
RAB3IL1Q8TBN0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.02■□□□□ 0.31
RAB3IL1Q8TBN0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 HLA-A-202ENST00000376806 1854 ntBASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 LINC02199-201ENST00000506655 2702 ntBASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 AC141257.4-201ENST00000634557 245 ntBASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 AC136944.6-201ENST00000634818 245 ntBASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 AC097493.4-201ENST00000641197 219 ntBASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 FRMD8P1-201ENST00000440433 1524 ntBASIC17.01■□□□□ 0.31
RAB3IL1Q8TBN0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 AL513477.1-201ENST00000602865 2407 ntBASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 AP003733.1-201ENST00000491725 852 ntBASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 AC012306.2-201ENST00000609350 630 ntBASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 AC007950.2-201ENST00000615045 2347 ntBASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB3IL1Q8TBN0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms