Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 RPS2P1-201ENST00000434010 821 ntBASIC16.42■□□□□ 0.22
KRT78Q8N1N4 AP002490.2-201ENST00000524791 560 ntBASIC16.42■□□□□ 0.22
KRT78Q8N1N4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT78Q8N1N4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 TERC-201ENST00000602385 541 ntBASIC16.41■□□□□ 0.22
KRT78Q8N1N4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT78Q8N1N4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms