Protein–RNA interactions for Protein: Q00059

TFAM, Transcription factor A, mitochondrial, humanhuman

Known RBP Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFAMQ00059 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TFAMQ00059 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TFAMQ00059 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TFAMQ00059 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.36■□□□□ 0.53
TFAMQ00059 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.36■□□□□ 0.53
TFAMQ00059 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TFAMQ00059 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.36■□□□□ 0.53
TFAMQ00059 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.36■□□□□ 0.53
TFAMQ00059 CXCL1P1-201ENST00000502804 216 ntBASIC18.36■□□□□ 0.53
TFAMQ00059 PMS2P7-201ENST00000506558 1336 ntBASIC18.36■□□□□ 0.53
TFAMQ00059 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.36■□□□□ 0.53
TFAMQ00059 AC107918.2-201ENST00000530817 355 ntBASIC18.36■□□□□ 0.53
TFAMQ00059 DUX4L17-201ENST00000557360 1267 ntBASIC18.36■□□□□ 0.53
TFAMQ00059 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.36■□□□□ 0.53
TFAMQ00059 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.36■□□□□ 0.53
TFAMQ00059 REXO1L3P-201ENST00000622202 1288 ntBASIC18.36■□□□□ 0.53
TFAMQ00059 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.36■□□□□ 0.53
TFAMQ00059 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.36■□□□□ 0.53
TFAMQ00059 AC010507.1-201ENST00000633895 436 ntBASIC18.36■□□□□ 0.53
TFAMQ00059 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TFAMQ00059 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TFAMQ00059 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TFAMQ00059 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TFAMQ00059 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TFAMQ00059 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.35■□□□□ 0.53
TFAMQ00059 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.35■□□□□ 0.53
TFAMQ00059 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.35■□□□□ 0.53
TFAMQ00059 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.35■□□□□ 0.53
TFAMQ00059 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
TFAMQ00059 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
TFAMQ00059 AL021920.2-201ENST00000624828 1351 ntBASIC18.35■□□□□ 0.53
TFAMQ00059 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TFAMQ00059 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.35■□□□□ 0.53
TFAMQ00059 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.35■□□□□ 0.53
TFAMQ00059 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.35■□□□□ 0.53
TFAMQ00059 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.35■□□□□ 0.53
TFAMQ00059 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.35■□□□□ 0.53
TFAMQ00059 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.35■□□□□ 0.53
TFAMQ00059 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.35■□□□□ 0.53
TFAMQ00059 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.35■□□□□ 0.53
TFAMQ00059 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.35■□□□□ 0.53
TFAMQ00059 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TFAMQ00059 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
TFAMQ00059 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.35■□□□□ 0.53
TFAMQ00059 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TFAMQ00059 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TFAMQ00059 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.35■□□□□ 0.53
TFAMQ00059 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TFAMQ00059 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TFAMQ00059 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.34■□□□□ 0.53
TFAMQ00059 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TFAMQ00059 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TFAMQ00059 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.34■□□□□ 0.53
TFAMQ00059 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TFAMQ00059 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.34■□□□□ 0.53
TFAMQ00059 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TFAMQ00059 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TFAMQ00059 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TFAMQ00059 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TFAMQ00059 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TFAMQ00059 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TFAMQ00059 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TFAMQ00059 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TFAMQ00059 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.34■□□□□ 0.53
TFAMQ00059 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.34■□□□□ 0.53
TFAMQ00059 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TFAMQ00059 FAM185BP-201ENST00000443595 716 ntBASIC18.34■□□□□ 0.53
TFAMQ00059 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.34■□□□□ 0.53
TFAMQ00059 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
TFAMQ00059 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TFAMQ00059 AC096734.2-201ENST00000562054 433 ntBASIC18.34■□□□□ 0.53
TFAMQ00059 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.34■□□□□ 0.53
TFAMQ00059 ACTL9-202ENST00000612068 1252 ntBASIC18.34■□□□□ 0.53
TFAMQ00059 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.34■□□□□ 0.53
TFAMQ00059 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
TFAMQ00059 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TFAMQ00059 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TFAMQ00059 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TFAMQ00059 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.34■□□□□ 0.53
TFAMQ00059 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.34■□□□□ 0.53
TFAMQ00059 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TFAMQ00059 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TFAMQ00059 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TFAMQ00059 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms