Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.34■□□□□ 0.37
PTPN3P26045 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
PTPN3P26045 KRT8P49-201ENST00000604166 1432 ntBASIC17.34■□□□□ 0.37
PTPN3P26045 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.34■□□□□ 0.37
PTPN3P26045 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.34■□□□□ 0.37
PTPN3P26045 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.34■□□□□ 0.37
PTPN3P26045 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 AC092171.3-201ENST00000610122 2651 ntBASIC17.34■□□□□ 0.37
PTPN3P26045 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN3P26045 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN3P26045 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PTPN3P26045 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN3P26045 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.33■□□□□ 0.37
PTPN3P26045 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.33■□□□□ 0.37
PTPN3P26045 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN3P26045 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN3P26045 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.33■□□□□ 0.37
PTPN3P26045 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.33■□□□□ 0.37
PTPN3P26045 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.33■□□□□ 0.37
PTPN3P26045 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN3P26045 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN3P26045 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN3P26045 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN3P26045 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.33■□□□□ 0.36
PTPN3P26045 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PTPN3P26045 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.33■□□□□ 0.36
PTPN3P26045 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN3P26045 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN3P26045 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.33■□□□□ 0.36
PTPN3P26045 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN3P26045 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.33■□□□□ 0.36
PTPN3P26045 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN3P26045 AP002490.2-201ENST00000524791 560 ntBASIC17.33■□□□□ 0.36
PTPN3P26045 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN3P26045 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.33■□□□□ 0.36
PTPN3P26045 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.33■□□□□ 0.36
PTPN3P26045 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.33■□□□□ 0.36
PTPN3P26045 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.33■□□□□ 0.36
PTPN3P26045 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN3P26045 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN3P26045 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN3P26045 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.33■□□□□ 0.36
PTPN3P26045 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN3P26045 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN3P26045 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN3P26045 PI4KAP1-204ENST00000612579 1703 ntBASIC17.33■□□□□ 0.36
PTPN3P26045 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN3P26045 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PTPN3P26045 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPN3P26045 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PTPN3P26045 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN3P26045 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN3P26045 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN3P26045 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PTPN3P26045 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPN3P26045 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN3P26045 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.32■□□□□ 0.36
PTPN3P26045 AC087163.2-201ENST00000457299 853 ntBASIC17.32■□□□□ 0.36
PTPN3P26045 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.32■□□□□ 0.36
PTPN3P26045 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PTPN3P26045 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN3P26045 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN3P26045 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.32■□□□□ 0.36
PTPN3P26045 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PTPN3P26045 AL031008.1-201ENST00000619963 541 ntBASIC17.32■□□□□ 0.36
PTPN3P26045 AC148477.8-201ENST00000624298 468 ntBASIC17.32■□□□□ 0.36
PTPN3P26045 AF228730.7-201ENST00000641842 219 ntBASIC17.32■□□□□ 0.36
PTPN3P26045 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PTPN3P26045 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN3P26045 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 AL603756.1-201ENST00000606511 2163 ntBASIC17.32■□□□□ 0.36
PTPN3P26045 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PTPN3P26045 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN3P26045 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN3P26045 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PTPN3P26045 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PTPN3P26045 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN3P26045 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
PTPN3P26045 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN3P26045 AL391256.1-201ENST00000443260 1855 ntBASIC17.31■□□□□ 0.36
PTPN3P26045 AC002310.6-201ENST00000624451 1377 ntBASIC17.31■□□□□ 0.36
PTPN3P26045 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms