Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LAMP1P11279 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LAMP1P11279 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.13■□□□□ 0.17
LAMP1P11279 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LAMP1P11279 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.13■□□□□ 0.17
LAMP1P11279 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.12■□□□□ 0.17
LAMP1P11279 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LAMP1P11279 DOC2GP-204ENST00000639052 2548 ntBASIC16.12■□□□□ 0.17
LAMP1P11279 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
LAMP1P11279 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.12■□□□□ 0.17
LAMP1P11279 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.12■□□□□ 0.17
LAMP1P11279 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 PRYP5-201ENST00000451909 266 ntBASIC16.12■□□□□ 0.17
LAMP1P11279 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.12■□□□□ 0.17
LAMP1P11279 AC106795.1-205ENST00000512851 1056 ntBASIC16.12■□□□□ 0.17
LAMP1P11279 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.12■□□□□ 0.17
LAMP1P11279 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.12■□□□□ 0.17
LAMP1P11279 AC064862.7-201ENST00000604520 867 ntBASIC16.12■□□□□ 0.17
LAMP1P11279 AL353135.1-201ENST00000606729 504 ntBASIC16.12■□□□□ 0.17
LAMP1P11279 AL732292.2-201ENST00000609649 430 ntBASIC16.12■□□□□ 0.17
LAMP1P11279 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.12■□□□□ 0.17
LAMP1P11279 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.12■□□□□ 0.17
LAMP1P11279 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LAMP1P11279 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.12■□□□□ 0.17
LAMP1P11279 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.12■□□□□ 0.17
LAMP1P11279 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LAMP1P11279 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.11■□□□□ 0.17
LAMP1P11279 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.11■□□□□ 0.17
LAMP1P11279 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LAMP1P11279 AC006449.5-201ENST00000610658 2098 ntBASIC16.11■□□□□ 0.17
LAMP1P11279 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.11■□□□□ 0.17
LAMP1P11279 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.11■□□□□ 0.17
LAMP1P11279 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.11■□□□□ 0.17
LAMP1P11279 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.11■□□□□ 0.17
LAMP1P11279 NKAPP1-205ENST00000585790 367 ntBASIC16.11■□□□□ 0.17
LAMP1P11279 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.11■□□□□ 0.17
LAMP1P11279 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.11■□□□□ 0.17
LAMP1P11279 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.11■□□□□ 0.17
LAMP1P11279 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.11■□□□□ 0.17
LAMP1P11279 AC243591.1-201ENST00000452967 1364 ntBASIC16.11■□□□□ 0.17
LAMP1P11279 AL021920.2-201ENST00000624828 1351 ntBASIC16.11■□□□□ 0.17
LAMP1P11279 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LAMP1P11279 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.11■□□□□ 0.17
LAMP1P11279 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.1■□□□□ 0.17
LAMP1P11279 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LAMP1P11279 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LAMP1P11279 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LAMP1P11279 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.1■□□□□ 0.17
LAMP1P11279 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LAMP1P11279 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LAMP1P11279 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LAMP1P11279 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
LAMP1P11279 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LAMP1P11279 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LAMP1P11279 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LAMP1P11279 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LAMP1P11279 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LAMP1P11279 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LAMP1P11279 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LAMP1P11279 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms