Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 FAM201B-201ENST00000458407 597 ntBASIC13.92□□□□□ -0.18
SSSCA1O60232 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.92□□□□□ -0.18
SSSCA1O60232 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.92□□□□□ -0.18
SSSCA1O60232 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.92□□□□□ -0.18
SSSCA1O60232 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.92□□□□□ -0.18
SSSCA1O60232 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
SSSCA1O60232 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.92□□□□□ -0.18
SSSCA1O60232 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.92□□□□□ -0.18
SSSCA1O60232 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.92□□□□□ -0.18
SSSCA1O60232 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.92□□□□□ -0.18
SSSCA1O60232 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.92□□□□□ -0.18
SSSCA1O60232 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.92□□□□□ -0.18
SSSCA1O60232 AC010460.3-201ENST00000511359 1579 ntBASIC13.92□□□□□ -0.18
SSSCA1O60232 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.92□□□□□ -0.18
SSSCA1O60232 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SSSCA1O60232 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.91□□□□□ -0.18
SSSCA1O60232 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SSSCA1O60232 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.91□□□□□ -0.18
SSSCA1O60232 MIR600HG-201ENST00000449175 5984 ntBASIC13.91□□□□□ -0.18
SSSCA1O60232 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.91□□□□□ -0.18
SSSCA1O60232 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.91□□□□□ -0.18
SSSCA1O60232 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
SSSCA1O60232 AL158047.1-201ENST00000445918 881 ntBASIC13.91□□□□□ -0.18
SSSCA1O60232 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.91□□□□□ -0.18
SSSCA1O60232 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.91□□□□□ -0.18
SSSCA1O60232 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.91□□□□□ -0.18
SSSCA1O60232 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.91□□□□□ -0.18
SSSCA1O60232 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SSSCA1O60232 AC109462.3-201ENST00000573934 613 ntBASIC13.91□□□□□ -0.18
SSSCA1O60232 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SSSCA1O60232 ITM2C-210ENST00000620962 501 ntBASIC13.91□□□□□ -0.18
SSSCA1O60232 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.91□□□□□ -0.18
SSSCA1O60232 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SSSCA1O60232 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.91□□□□□ -0.18
SSSCA1O60232 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.91□□□□□ -0.18
SSSCA1O60232 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.91□□□□□ -0.18
SSSCA1O60232 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSSCA1O60232 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.9□□□□□ -0.18
SSSCA1O60232 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SSSCA1O60232 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SSSCA1O60232 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SSSCA1O60232 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SSSCA1O60232 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.9□□□□□ -0.18
SSSCA1O60232 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SSSCA1O60232 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SSSCA1O60232 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.9□□□□□ -0.18
SSSCA1O60232 COX5BP2-201ENST00000392354 334 ntBASIC13.9□□□□□ -0.18
SSSCA1O60232 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.9□□□□□ -0.18
SSSCA1O60232 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.9□□□□□ -0.18
SSSCA1O60232 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.9□□□□□ -0.18
SSSCA1O60232 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SSSCA1O60232 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.9□□□□□ -0.18
SSSCA1O60232 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.9□□□□□ -0.18
SSSCA1O60232 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.9□□□□□ -0.18
SSSCA1O60232 AP002490.2-201ENST00000524791 560 ntBASIC13.9□□□□□ -0.18
SSSCA1O60232 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.9□□□□□ -0.18
SSSCA1O60232 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms