Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC002056.1-201ENST00000395613 760 ntBASIC20.26■□□□□ 0.83
FOXN1O15353 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN1O15353 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXN1O15353 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.26■□□□□ 0.83
FOXN1O15353 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXN1O15353 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.26■□□□□ 0.83
FOXN1O15353 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.26■□□□□ 0.83
FOXN1O15353 SPTSSB-204ENST00000617024 1292 ntBASIC20.26■□□□□ 0.83
FOXN1O15353 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN1O15353 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
FOXN1O15353 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN1O15353 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.26■□□□□ 0.83
FOXN1O15353 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN1O15353 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
FOXN1O15353 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
FOXN1O15353 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN1O15353 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN1O15353 AC108860.2-201ENST00000562760 2183 ntBASIC20.25■□□□□ 0.83
FOXN1O15353 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXN1O15353 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN1O15353 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXN1O15353 AC141586.5-201ENST00000624546 2050 ntBASIC20.25■□□□□ 0.83
FOXN1O15353 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN1O15353 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXN1O15353 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN1O15353 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN1O15353 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.25■□□□□ 0.83
FOXN1O15353 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
FOXN1O15353 HAUS4P1-201ENST00000406739 1145 ntBASIC20.25■□□□□ 0.83
FOXN1O15353 HCG4-201ENST00000418983 998 ntBASIC20.25■□□□□ 0.83
FOXN1O15353 AC092580.3-201ENST00000430932 139 ntBASIC20.25■□□□□ 0.83
FOXN1O15353 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
FOXN1O15353 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.25■□□□□ 0.83
FOXN1O15353 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN1O15353 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXN1O15353 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXN1O15353 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXN1O15353 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
FOXN1O15353 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.25■□□□□ 0.83
FOXN1O15353 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXN1O15353 AC099522.2-201ENST00000607001 744 ntBASIC20.25■□□□□ 0.83
FOXN1O15353 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXN1O15353 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXN1O15353 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXN1O15353 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
FOXN1O15353 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN1O15353 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
FOXN1O15353 AC080080.1-201ENST00000625121 2420 ntBASIC20.25■□□□□ 0.83
FOXN1O15353 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN1O15353 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN1O15353 AC010460.3-201ENST00000511359 1579 ntBASIC20.25■□□□□ 0.83
FOXN1O15353 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
FOXN1O15353 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
FOXN1O15353 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
FOXN1O15353 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.24■□□□□ 0.83
FOXN1O15353 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 AL355312.1-201ENST00000407115 2176 ntBASIC20.24■□□□□ 0.83
FOXN1O15353 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
FOXN1O15353 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.24■□□□□ 0.83
FOXN1O15353 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 DUTP2-201ENST00000519164 463 ntBASIC20.24■□□□□ 0.83
FOXN1O15353 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.24■□□□□ 0.83
FOXN1O15353 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
FOXN1O15353 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXN1O15353 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
FOXN1O15353 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXN1O15353 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXN1O15353 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN1O15353 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXN1O15353 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXN1O15353 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXN1O15353 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN1O15353 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.23■□□□□ 0.83
FOXN1O15353 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN1O15353 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN1O15353 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
FOXN1O15353 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN1O15353 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN1O15353 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXN1O15353 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN1O15353 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.23■□□□□ 0.83
FOXN1O15353 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.23■□□□□ 0.83
FOXN1O15353 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXN1O15353 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN1O15353 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms