Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 KRT18P3-201ENST00000451602 1288 ntBASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A20Q9NP91 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 MIR1233-2-201ENST00000408138 82 ntBASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 MIR1233-1-201ENST00000408722 82 ntBASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 KRT18P2-201ENST00000447938 1258 ntBASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 ACTL9-202ENST00000612068 1252 ntBASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 AC010507.1-201ENST00000633895 436 ntBASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC6A20Q9NP91 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 AL021920.2-201ENST00000624828 1351 ntBASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 AC129492.6-201ENST00000611383 1305 ntBASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms