Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PHOX2BQ99453 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PHOX2BQ99453 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.21■□□□□ 0.34
PHOX2BQ99453 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PHOX2BQ99453 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHOX2BQ99453 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHOX2BQ99453 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHOX2BQ99453 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 AL512384.1-201ENST00000406683 331 ntBASIC17.2■□□□□ 0.34
PHOX2BQ99453 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 AC027369.6-201ENST00000525520 931 ntBASIC17.2■□□□□ 0.34
PHOX2BQ99453 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 AC068880.1-201ENST00000507289 2297 ntBASIC17.2■□□□□ 0.34
PHOX2BQ99453 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHOX2BQ99453 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHOX2BQ99453 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHOX2BQ99453 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHOX2BQ99453 AC097637.2-201ENST00000624096 1997 ntBASIC17.2■□□□□ 0.34
PHOX2BQ99453 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHOX2BQ99453 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHOX2BQ99453 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHOX2BQ99453 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHOX2BQ99453 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHOX2BQ99453 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHOX2BQ99453 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.2■□□□□ 0.34
PHOX2BQ99453 AC139713.2-201ENST00000641328 2723 ntBASIC17.2■□□□□ 0.34
PHOX2BQ99453 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 AC007541.1-201ENST00000570282 1469 ntBASIC17.19■□□□□ 0.34
PHOX2BQ99453 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 KRT8P44-201ENST00000441609 1350 ntBASIC17.19■□□□□ 0.34
PHOX2BQ99453 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHOX2BQ99453 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 AC098614.1-201ENST00000368528 745 ntBASIC17.19■□□□□ 0.34
PHOX2BQ99453 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHOX2BQ99453 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 AC119751.2-201ENST00000504529 210 ntBASIC17.19■□□□□ 0.34
PHOX2BQ99453 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHOX2BQ99453 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 AL049757.1-201ENST00000616842 1596 ntBASIC17.19■□□□□ 0.34
PHOX2BQ99453 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.19■□□□□ 0.34
PHOX2BQ99453 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PHOX2BQ99453 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.18■□□□□ 0.34
PHOX2BQ99453 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHOX2BQ99453 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.18■□□□□ 0.34
PHOX2BQ99453 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.18■□□□□ 0.34
PHOX2BQ99453 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.18■□□□□ 0.34
PHOX2BQ99453 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHOX2BQ99453 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHOX2BQ99453 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHOX2BQ99453 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.18■□□□□ 0.34
PHOX2BQ99453 AC092506.1-202ENST00000401022 528 ntBASIC17.18■□□□□ 0.34
PHOX2BQ99453 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PHOX2BQ99453 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.18■□□□□ 0.34
PHOX2BQ99453 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.18■□□□□ 0.34
PHOX2BQ99453 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PHOX2BQ99453 LINC01225-203ENST00000563550 1244 ntBASIC17.18■□□□□ 0.34
PHOX2BQ99453 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC17.18■□□□□ 0.34
PHOX2BQ99453 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PHOX2BQ99453 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHOX2BQ99453 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHOX2BQ99453 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PHOX2BQ99453 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHOX2BQ99453 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
PHOX2BQ99453 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
PHOX2BQ99453 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHOX2BQ99453 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHOX2BQ99453 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PHOX2BQ99453 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PHOX2BQ99453 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
PHOX2BQ99453 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms