Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB43Q86YS6 AC148477.5-201ENST00000625164 1645 ntBASIC16.33■□□□□ 0.2
RAB43Q86YS6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB43Q86YS6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB43Q86YS6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB43Q86YS6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB43Q86YS6 CICP6-201ENST00000457191 2729 ntBASIC16.32■□□□□ 0.2
RAB43Q86YS6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB43Q86YS6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB43Q86YS6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB43Q86YS6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB43Q86YS6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB43Q86YS6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB43Q86YS6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 MTDHP5-201ENST00000598980 586 ntBASIC16.32■□□□□ 0.2
RAB43Q86YS6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 AC009949.1-201ENST00000623048 1830 ntBASIC16.32■□□□□ 0.2
RAB43Q86YS6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB43Q86YS6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB43Q86YS6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB43Q86YS6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
RAB43Q86YS6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
RAB43Q86YS6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB43Q86YS6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB43Q86YS6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
RAB43Q86YS6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB43Q86YS6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB43Q86YS6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAB43Q86YS6 AC006504.4-201ENST00000592118 1568 ntBASIC16.31■□□□□ 0.2
RAB43Q86YS6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
RAB43Q86YS6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB43Q86YS6 RPSAP43-201ENST00000402237 625 ntBASIC16.31■□□□□ 0.2
RAB43Q86YS6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB43Q86YS6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB43Q86YS6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RAB43Q86YS6 AC022211.2-201ENST00000585075 2527 ntBASIC16.31■□□□□ 0.2
RAB43Q86YS6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAB43Q86YS6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB43Q86YS6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB43Q86YS6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 AC100803.2-201ENST00000562459 1963 ntBASIC16.31■□□□□ 0.2
RAB43Q86YS6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB43Q86YS6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB43Q86YS6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB43Q86YS6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB43Q86YS6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RAB43Q86YS6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB43Q86YS6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB43Q86YS6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB43Q86YS6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB43Q86YS6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB43Q86YS6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB43Q86YS6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAB43Q86YS6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RAB43Q86YS6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB43Q86YS6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB43Q86YS6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB43Q86YS6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB43Q86YS6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RAB43Q86YS6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAB43Q86YS6 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.3■□□□□ 0.2
RAB43Q86YS6 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms