Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAE1P78406 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RAE1P78406 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAE1P78406 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
RAE1P78406 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAE1P78406 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAE1P78406 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.13■□□□□ 0.17
RAE1P78406 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
RAE1P78406 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAE1P78406 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAE1P78406 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.12■□□□□ 0.17
RAE1P78406 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RAE1P78406 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RAE1P78406 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.12■□□□□ 0.17
RAE1P78406 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.12■□□□□ 0.17
RAE1P78406 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAE1P78406 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAE1P78406 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RAE1P78406 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.12■□□□□ 0.17
RAE1P78406 AC087163.2-201ENST00000457299 853 ntBASIC16.12■□□□□ 0.17
RAE1P78406 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.12■□□□□ 0.17
RAE1P78406 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.12■□□□□ 0.17
RAE1P78406 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RAE1P78406 LINC01711-201ENST00000598340 967 ntBASIC16.12■□□□□ 0.17
RAE1P78406 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAE1P78406 AC013467.2-201ENST00000605472 835 ntBASIC16.12■□□□□ 0.17
RAE1P78406 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RAE1P78406 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAE1P78406 REXO1L3P-201ENST00000622202 1288 ntBASIC16.12■□□□□ 0.17
RAE1P78406 AC107918.4-202ENST00000641623 219 ntBASIC16.12■□□□□ 0.17
RAE1P78406 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAE1P78406 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.12■□□□□ 0.17
RAE1P78406 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAE1P78406 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAE1P78406 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAE1P78406 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.12■□□□□ 0.17
RAE1P78406 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAE1P78406 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.12■□□□□ 0.17
RAE1P78406 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.12■□□□□ 0.17
RAE1P78406 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RAE1P78406 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.12■□□□□ 0.17
RAE1P78406 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RAE1P78406 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RAE1P78406 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.12■□□□□ 0.17
RAE1P78406 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.12■□□□□ 0.17
RAE1P78406 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.12■□□□□ 0.17
RAE1P78406 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAE1P78406 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAE1P78406 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAE1P78406 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
RAE1P78406 TOP3BP1-201ENST00000420768 1380 ntBASIC16.12■□□□□ 0.17
RAE1P78406 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAE1P78406 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAE1P78406 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.12■□□□□ 0.17
RAE1P78406 AC002310.6-201ENST00000624451 1377 ntBASIC16.12■□□□□ 0.17
RAE1P78406 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.12■□□□□ 0.17
RAE1P78406 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RAE1P78406 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAE1P78406 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.11■□□□□ 0.17
RAE1P78406 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.11■□□□□ 0.17
RAE1P78406 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RAE1P78406 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RAE1P78406 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.11■□□□□ 0.17
RAE1P78406 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.11■□□□□ 0.17
RAE1P78406 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.11■□□□□ 0.17
RAE1P78406 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.11■□□□□ 0.17
RAE1P78406 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.11■□□□□ 0.17
RAE1P78406 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.11■□□□□ 0.17
RAE1P78406 LAGE3P1-201ENST00000425356 484 ntBASIC16.11■□□□□ 0.17
RAE1P78406 KRT18P27-201ENST00000427733 1299 ntBASIC16.11■□□□□ 0.17
RAE1P78406 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.11■□□□□ 0.17
RAE1P78406 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.11■□□□□ 0.17
RAE1P78406 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RAE1P78406 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.11■□□□□ 0.17
RAE1P78406 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RAE1P78406 TP73-AS1-207ENST00000624167 988 ntBASIC16.11■□□□□ 0.17
RAE1P78406 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.11■□□□□ 0.17
RAE1P78406 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RAE1P78406 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAE1P78406 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms