Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CXCR4P61073 GPR89P-201ENST00000407924 1495 ntBASIC15.55■□□□□ 0.08
CXCR4P61073 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CXCR4P61073 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.55■□□□□ 0.08
CXCR4P61073 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CXCR4P61073 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
CXCR4P61073 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.55■□□□□ 0.08
CXCR4P61073 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CXCR4P61073 FAM8A6P-201ENST00000407496 1135 ntBASIC15.55■□□□□ 0.08
CXCR4P61073 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.55■□□□□ 0.08
CXCR4P61073 AL441883.1-201ENST00000566170 1045 ntBASIC15.55■□□□□ 0.08
CXCR4P61073 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.55■□□□□ 0.08
CXCR4P61073 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.55■□□□□ 0.08
CXCR4P61073 AL031432.5-201ENST00000641059 760 ntBASIC15.55■□□□□ 0.08
CXCR4P61073 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CXCR4P61073 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.55■□□□□ 0.08
CXCR4P61073 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CXCR4P61073 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CXCR4P61073 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CXCR4P61073 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.55■□□□□ 0.08
CXCR4P61073 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CXCR4P61073 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CXCR4P61073 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
CXCR4P61073 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CXCR4P61073 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CXCR4P61073 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CXCR4P61073 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CXCR4P61073 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.55■□□□□ 0.08
CXCR4P61073 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CXCR4P61073 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CXCR4P61073 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CXCR4P61073 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.54■□□□□ 0.08
CXCR4P61073 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CXCR4P61073 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CXCR4P61073 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 SPDYE15P-201ENST00000424157 909 ntBASIC15.54■□□□□ 0.08
CXCR4P61073 LIN28AP1-201ENST00000429574 405 ntBASIC15.54■□□□□ 0.08
CXCR4P61073 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.54■□□□□ 0.08
CXCR4P61073 SLC25A3P1-201ENST00000443844 931 ntBASIC15.54■□□□□ 0.08
CXCR4P61073 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.54■□□□□ 0.08
CXCR4P61073 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.54■□□□□ 0.08
CXCR4P61073 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.54■□□□□ 0.08
CXCR4P61073 AC145285.6-201ENST00000604632 637 ntBASIC15.54■□□□□ 0.08
CXCR4P61073 AC019129.2-201ENST00000609837 1235 ntBASIC15.54■□□□□ 0.08
CXCR4P61073 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CXCR4P61073 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.54■□□□□ 0.08
CXCR4P61073 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.54■□□□□ 0.08
CXCR4P61073 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
CXCR4P61073 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
CXCR4P61073 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CXCR4P61073 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CXCR4P61073 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CXCR4P61073 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CXCR4P61073 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.53■□□□□ 0.08
CXCR4P61073 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.53■□□□□ 0.08
CXCR4P61073 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CXCR4P61073 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CXCR4P61073 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CXCR4P61073 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CXCR4P61073 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CXCR4P61073 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms