Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RHBDL3P58872 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RHBDL3P58872 TUBB3P1-201ENST00000405796 1332 ntBASIC19.97■□□□□ 0.79
RHBDL3P58872 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RHBDL3P58872 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.97■□□□□ 0.79
RHBDL3P58872 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RHBDL3P58872 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RHBDL3P58872 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RHBDL3P58872 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDL3P58872 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDL3P58872 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.96■□□□□ 0.79
RHBDL3P58872 AC141586.5-201ENST00000624546 2050 ntBASIC19.96■□□□□ 0.79
RHBDL3P58872 AC020763.4-201ENST00000623414 4170 ntBASIC19.96■□□□□ 0.79
RHBDL3P58872 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDL3P58872 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDL3P58872 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDL3P58872 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDL3P58872 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDL3P58872 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.96■□□□□ 0.79
RHBDL3P58872 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.96■□□□□ 0.79
RHBDL3P58872 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.96■□□□□ 0.79
RHBDL3P58872 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
RHBDL3P58872 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.96■□□□□ 0.79
RHBDL3P58872 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
RHBDL3P58872 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDL3P58872 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.96■□□□□ 0.79
RHBDL3P58872 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RHBDL3P58872 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDL3P58872 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.96■□□□□ 0.79
RHBDL3P58872 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDL3P58872 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDL3P58872 AC092068.3-201ENST00000587894 2016 ntBASIC19.96■□□□□ 0.79
RHBDL3P58872 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RHBDL3P58872 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDL3P58872 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RHBDL3P58872 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDL3P58872 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDL3P58872 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.95■□□□□ 0.78
RHBDL3P58872 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.95■□□□□ 0.78
RHBDL3P58872 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDL3P58872 AL671710.1-201ENST00000610245 2349 ntBASIC19.95■□□□□ 0.78
RHBDL3P58872 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.95■□□□□ 0.78
RHBDL3P58872 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDL3P58872 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.95■□□□□ 0.78
RHBDL3P58872 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDL3P58872 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.95■□□□□ 0.78
RHBDL3P58872 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
RHBDL3P58872 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RHBDL3P58872 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.95■□□□□ 0.78
RHBDL3P58872 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDL3P58872 ALG1L8P-201ENST00000533887 760 ntBASIC19.95■□□□□ 0.78
RHBDL3P58872 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
RHBDL3P58872 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDL3P58872 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDL3P58872 AC021097.1-201ENST00000607902 574 ntBASIC19.95■□□□□ 0.78
RHBDL3P58872 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDL3P58872 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.95■□□□□ 0.78
RHBDL3P58872 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.95■□□□□ 0.78
RHBDL3P58872 SNX33P1-201ENST00000592116 1762 ntBASIC19.95■□□□□ 0.78
RHBDL3P58872 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDL3P58872 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDL3P58872 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDL3P58872 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDL3P58872 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDL3P58872 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.95■□□□□ 0.78
RHBDL3P58872 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDL3P58872 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RHBDL3P58872 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RHBDL3P58872 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RHBDL3P58872 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RHBDL3P58872 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RHBDL3P58872 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RHBDL3P58872 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.94■□□□□ 0.78
RHBDL3P58872 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RHBDL3P58872 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
RHBDL3P58872 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.94■□□□□ 0.78
RHBDL3P58872 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RHBDL3P58872 AC142381.1-201ENST00000426099 345 ntBASIC19.94■□□□□ 0.78
RHBDL3P58872 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.94■□□□□ 0.78
RHBDL3P58872 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RHBDL3P58872 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RHBDL3P58872 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.94■□□□□ 0.78
RHBDL3P58872 AC013467.2-201ENST00000605472 835 ntBASIC19.94■□□□□ 0.78
RHBDL3P58872 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RHBDL3P58872 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.94■□□□□ 0.78
RHBDL3P58872 TUBB8P12-201ENST00000308911 1335 ntBASIC19.94■□□□□ 0.78
RHBDL3P58872 TUBB7P-202ENST00000428444 1305 ntBASIC19.94■□□□□ 0.78
RHBDL3P58872 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RHBDL3P58872 TUBB8P7-204ENST00000567960 1332 ntBASIC19.94■□□□□ 0.78
RHBDL3P58872 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
RHBDL3P58872 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RHBDL3P58872 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RHBDL3P58872 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
RHBDL3P58872 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RHBDL3P58872 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RHBDL3P58872 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RHBDL3P58872 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RHBDL3P58872 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RHBDL3P58872 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.93■□□□□ 0.78
RHBDL3P58872 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms