Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 NKILA-202ENST00000614771 2598 ntBASIC15.18■□□□□ 0.02
TRAF3IP2O43734 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 AC136632.2-201ENST00000512891 861 ntBASIC15.18■□□□□ 0.02
TRAF3IP2O43734 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 AC012640.2-201ENST00000561606 901 ntBASIC15.18■□□□□ 0.02
TRAF3IP2O43734 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 FAM215A-202ENST00000632077 792 ntBASIC15.18■□□□□ 0.02
TRAF3IP2O43734 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP2O43734 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 RPS15P9-201ENST00000494093 319 ntBASIC15.17■□□□□ 0.02
TRAF3IP2O43734 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 AC105339.3-201ENST00000560043 636 ntBASIC15.17■□□□□ 0.02
TRAF3IP2O43734 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 MIR7706-201ENST00000613747 67 ntBASIC15.17■□□□□ 0.02
TRAF3IP2O43734 AL773604.1-201ENST00000617417 272 ntBASIC15.17■□□□□ 0.02
TRAF3IP2O43734 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 AF228730.7-201ENST00000641842 219 ntBASIC15.17■□□□□ 0.02
TRAF3IP2O43734 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 PCDHB17P-201ENST00000539533 2393 ntBASIC15.17■□□□□ 0.02
TRAF3IP2O43734 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAF3IP2O43734 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 AC011676.5-201ENST00000624864 2660 ntBASIC15.16■□□□□ 0.02
TRAF3IP2O43734 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 AP002414.3-201ENST00000589352 1468 ntBASIC15.16■□□□□ 0.02
TRAF3IP2O43734 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAF3IP2O43734 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms