Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SMAD6O43541 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 AL021920.2-201ENST00000624828 1351 ntBASIC17.15■□□□□ 0.34
SMAD6O43541 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SMAD6O43541 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SMAD6O43541 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD6O43541 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SMAD6O43541 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD6O43541 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD6O43541 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SMAD6O43541 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD6O43541 FAM58CP-201ENST00000435741 640 ntBASIC17.14■□□□□ 0.33
SMAD6O43541 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.14■□□□□ 0.33
SMAD6O43541 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SMAD6O43541 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD6O43541 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
SMAD6O43541 AL031432.2-201ENST00000566714 459 ntBASIC17.14■□□□□ 0.33
SMAD6O43541 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.14■□□□□ 0.33
SMAD6O43541 AL928711.1-201ENST00000570165 459 ntBASIC17.14■□□□□ 0.33
SMAD6O43541 MIR4469-201ENST00000583919 79 ntBASIC17.14■□□□□ 0.33
SMAD6O43541 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.14■□□□□ 0.33
SMAD6O43541 AL691403.2-201ENST00000618460 490 ntBASIC17.14■□□□□ 0.33
SMAD6O43541 AC091812.2-201ENST00000619081 385 ntBASIC17.14■□□□□ 0.33
SMAD6O43541 AL645728.2-201ENST00000641974 660 ntBASIC17.14■□□□□ 0.33
SMAD6O43541 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD6O43541 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SMAD6O43541 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD6O43541 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SMAD6O43541 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD6O43541 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD6O43541 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD6O43541 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.14■□□□□ 0.33
SMAD6O43541 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD6O43541 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD6O43541 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD6O43541 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD6O43541 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.14■□□□□ 0.33
SMAD6O43541 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD6O43541 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD6O43541 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SMAD6O43541 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.13■□□□□ 0.33
SMAD6O43541 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD6O43541 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD6O43541 AC012569.1-201ENST00000591191 1524 ntBASIC17.13■□□□□ 0.33
SMAD6O43541 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD6O43541 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD6O43541 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD6O43541 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD6O43541 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.13■□□□□ 0.33
SMAD6O43541 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.13■□□□□ 0.33
SMAD6O43541 YBX1P5-201ENST00000509441 847 ntBASIC17.13■□□□□ 0.33
SMAD6O43541 MPDU1-223ENST00000582151 728 ntBASIC17.13■□□□□ 0.33
SMAD6O43541 AC134684.3-201ENST00000641758 218 ntBASIC17.13■□□□□ 0.33
SMAD6O43541 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD6O43541 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.13■□□□□ 0.33
SMAD6O43541 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD6O43541 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD6O43541 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SMAD6O43541 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.13■□□□□ 0.33
SMAD6O43541 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD6O43541 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SMAD6O43541 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SMAD6O43541 PCDHB17P-201ENST00000539533 2393 ntBASIC17.13■□□□□ 0.33
SMAD6O43541 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.13■□□□□ 0.33
SMAD6O43541 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.12■□□□□ 0.33
SMAD6O43541 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.12■□□□□ 0.33
SMAD6O43541 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.12■□□□□ 0.33
SMAD6O43541 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.12■□□□□ 0.33
SMAD6O43541 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SMAD6O43541 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SMAD6O43541 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SMAD6O43541 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SMAD6O43541 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.12■□□□□ 0.33
SMAD6O43541 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SMAD6O43541 AC091167.2-201ENST00000579581 588 ntBASIC17.12■□□□□ 0.33
SMAD6O43541 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.12■□□□□ 0.33
SMAD6O43541 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
SMAD6O43541 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 AC092902.6-201ENST00000641783 218 ntBASIC17.12■□□□□ 0.33
SMAD6O43541 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SMAD6O43541 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD6O43541 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms