Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 CR383656.12-201ENST00000549567 513 ntBASIC19.2■□□□□ 0.66
LOC285556D6RIA3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.2■□□□□ 0.66
LOC285556D6RIA3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.2■□□□□ 0.66
LOC285556D6RIA3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.2■□□□□ 0.66
LOC285556D6RIA3 AC013467.2-201ENST00000605472 835 ntBASIC19.2■□□□□ 0.66
LOC285556D6RIA3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.2■□□□□ 0.66
LOC285556D6RIA3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.2■□□□□ 0.66
LOC285556D6RIA3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LOC285556D6RIA3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.2■□□□□ 0.66
LOC285556D6RIA3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.2■□□□□ 0.66
LOC285556D6RIA3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LOC285556D6RIA3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.2■□□□□ 0.66
LOC285556D6RIA3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 MTND6P24-201ENST00000440466 518 ntBASIC19.19■□□□□ 0.66
LOC285556D6RIA3 API5-211ENST00000534695 560 ntTSL 5 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 GK-202ENST00000378941 458 ntTSL 3 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LOC285556D6RIA3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 RPL37AP1-201ENST00000412502 279 ntBASIC19.18■□□□□ 0.66
LOC285556D6RIA3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 AL512361.1-201ENST00000554200 418 ntBASIC19.18■□□□□ 0.66
LOC285556D6RIA3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 SNX33P1-201ENST00000592116 1762 ntBASIC19.18■□□□□ 0.66
LOC285556D6RIA3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.18■□□□□ 0.66
LOC285556D6RIA3 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.18■□□□□ 0.66
LOC285556D6RIA3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LOC285556D6RIA3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 AC087499.5-201ENST00000452760 1342 ntBASIC19.17■□□□□ 0.66
LOC285556D6RIA3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.17■□□□□ 0.66
LOC285556D6RIA3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LOC285556D6RIA3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LOC285556D6RIA3 U91328.1-201ENST00000437528 223 ntBASIC19.16■□□□□ 0.66
LOC285556D6RIA3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms