Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 CEND1P1-201ENST00000451006 455 ntBASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 KRT19P2-202ENST00000557173 1012 ntBASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC6Q9UBN7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 CNN2P11-201ENST00000429351 262 ntBASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 RHOQP3-201ENST00000437982 621 ntBASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC6Q9UBN7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HDAC6Q9UBN7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 PI4KAP1-204ENST00000612579 1703 ntBASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 AL031432.2-201ENST00000566714 459 ntBASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 AL928711.1-201ENST00000570165 459 ntBASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC6Q9UBN7 AC025580.3-201ENST00000617932 1424 ntBASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms