Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 SPDYE11-202ENST00000450699 704 ntBASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 AC023141.5-201ENST00000458585 616 ntBASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 DUX4L17-201ENST00000557360 1267 ntBASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 SPDYE9P-201ENST00000570642 692 ntBASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 SPDYE10P-202ENST00000612005 668 ntBASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 SPDYE8P-202ENST00000612377 668 ntBASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 AC093512.1-201ENST00000617969 520 ntBASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 GNAS-203ENST00000306120 1878 ntBASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 AC012569.1-201ENST00000591191 1524 ntBASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 SLC22A20-204ENST00000530038 1673 ntBASIC21.09■□□□□ 0.97
CCDC85AQ96PX6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 LINC00628-201ENST00000628516 1289 ntBASIC21.08■□□□□ 0.97
CCDC85AQ96PX6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC85AQ96PX6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC85AQ96PX6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC85AQ96PX6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC85AQ96PX6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC85AQ96PX6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 TFAMP1-201ENST00000412727 736 ntBASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 AC005237.2-201ENST00000434368 219 ntBASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 AC079140.1-201ENST00000508039 487 ntBASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC85AQ96PX6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 AL627223.1-201ENST00000416693 442 ntBASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 AC243562.1-201ENST00000560672 389 ntBASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 AL135744.1-201ENST00000565098 629 ntBASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 AC005412.3-201ENST00000580309 715 ntBASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC85AQ96PX6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms