Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 AC063952.2-201ENST00000498792 1227 ntBASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 DUX4L17-201ENST00000557360 1267 ntBASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 AC011498.5-201ENST00000592027 486 ntBASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 LINC00895-201ENST00000629028 1637 ntBASIC18.34■□□□□ 0.53
CCDC170Q8IYT3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC170Q8IYT3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC170Q8IYT3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC170Q8IYT3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC170Q8IYT3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC170Q8IYT3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC170Q8IYT3 AC092364.2-201ENST00000596710 2692 ntBASIC18.33■□□□□ 0.53
CCDC170Q8IYT3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 ACTG1P4-201ENST00000425123 1122 ntBASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 KRT18P57-201ENST00000443599 1254 ntBASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 AL671277.2-201ENST00000458060 996 ntBASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 MTHFR-217ENST00000641820 1569 ntBASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 AC079328.2-201ENST00000561241 3354 ntBASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC170Q8IYT3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 ALOX12P2-203ENST00000570921 1945 ntBASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 KRT8P26-201ENST00000534154 1276 ntBASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 AC007950.2-201ENST00000615045 2347 ntBASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC170Q8IYT3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC170Q8IYT3 ME2P1-201ENST00000426028 1970 ntBASIC18.31■□□□□ 0.52
CCDC170Q8IYT3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms