Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 AL355306.1-201ENST00000415580 579 ntBASIC18.96■□□□□ 0.63
TRIM50Q86XT4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 AC140658.5-201ENST00000438532 169 ntBASIC18.96■□□□□ 0.63
TRIM50Q86XT4 TIMM8BP1-201ENST00000452384 211 ntBASIC18.96■□□□□ 0.63
TRIM50Q86XT4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
TRIM50Q86XT4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 AC068880.1-201ENST00000507289 2297 ntBASIC18.95■□□□□ 0.62
TRIM50Q86XT4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 GNAS-203ENST00000306120 1878 ntBASIC18.95■□□□□ 0.62
TRIM50Q86XT4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 HMGA1P7-201ENST00000406908 502 ntBASIC18.95■□□□□ 0.62
TRIM50Q86XT4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 AC004835.2-201ENST00000603762 682 ntBASIC18.95■□□□□ 0.62
TRIM50Q86XT4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 AL645728.2-201ENST00000641974 660 ntBASIC18.95■□□□□ 0.62
TRIM50Q86XT4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM50Q86XT4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 AL121761.2-201ENST00000598007 1648 ntBASIC18.94■□□□□ 0.62
TRIM50Q86XT4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 AC002056.1-201ENST00000395613 760 ntBASIC18.94■□□□□ 0.62
TRIM50Q86XT4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 KRT8P48-201ENST00000515599 1220 ntBASIC18.94■□□□□ 0.62
TRIM50Q86XT4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 MIR4515-201ENST00000584082 81 ntBASIC18.94■□□□□ 0.62
TRIM50Q86XT4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms