Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 TSPY26P-202ENST00000565928 3884 ntBASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 AL513523.2-202ENST00000427283 2040 ntBASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 AC010460.3-201ENST00000511359 1579 ntBASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 AC063952.2-201ENST00000498792 1227 ntBASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTCHD4Q6ZW05 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 MYCLP1-201ENST00000372451 1075 ntBASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.73■□□□□ 0.11
PTCHD4Q6ZW05 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms