Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDH1Q08174 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDH1Q08174 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDH1Q08174 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH1Q08174 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDH1Q08174 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH1Q08174 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH1Q08174 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH1Q08174 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH1Q08174 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH1Q08174 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH1Q08174 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDH1Q08174 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDH1Q08174 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDH1Q08174 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDH1Q08174 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.46■□□□□ 0.22
PCDH1Q08174 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PCDH1Q08174 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDH1Q08174 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PCDH1Q08174 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH1Q08174 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
PCDH1Q08174 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDH1Q08174 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDH1Q08174 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH1Q08174 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDH1Q08174 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH1Q08174 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
PCDH1Q08174 AC243591.1-201ENST00000452967 1364 ntBASIC16.45■□□□□ 0.22
PCDH1Q08174 AL021920.2-201ENST00000624828 1351 ntBASIC16.45■□□□□ 0.22
PCDH1Q08174 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 AC078925.2-201ENST00000624013 1973 ntBASIC16.45■□□□□ 0.22
PCDH1Q08174 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDH1Q08174 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PCDH1Q08174 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PCDH1Q08174 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH1Q08174 LINC00895-201ENST00000629028 1637 ntBASIC16.45■□□□□ 0.22
PCDH1Q08174 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDH1Q08174 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH1Q08174 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH1Q08174 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PCDH1Q08174 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH1Q08174 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH1Q08174 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH1Q08174 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH1Q08174 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
PCDH1Q08174 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDH1Q08174 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDH1Q08174 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH1Q08174 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH1Q08174 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDH1Q08174 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDH1Q08174 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH1Q08174 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDH1Q08174 AC021087.4-201ENST00000563761 564 ntBASIC16.44■□□□□ 0.22
PCDH1Q08174 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDH1Q08174 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PCDH1Q08174 AF228730.7-201ENST00000641842 219 ntBASIC16.44■□□□□ 0.22
PCDH1Q08174 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH1Q08174 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH1Q08174 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH1Q08174 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH1Q08174 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH1Q08174 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH1Q08174 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PCDH1Q08174 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH1Q08174 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDH1Q08174 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDH1Q08174 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH1Q08174 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH1Q08174 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PCDH1Q08174 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
PCDH1Q08174 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH1Q08174 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH1Q08174 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH1Q08174 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH1Q08174 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH1Q08174 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH1Q08174 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms