Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20■□□□□ 0.79
RHBDL3P58872 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20■□□□□ 0.79
RHBDL3P58872 CD99-202ENST00000381180 530 ntTSL 2 BASIC20■□□□□ 0.79
RHBDL3P58872 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20■□□□□ 0.79
RHBDL3P58872 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20■□□□□ 0.79
RHBDL3P58872 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20■□□□□ 0.79
RHBDL3P58872 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20■□□□□ 0.79
RHBDL3P58872 AC027307.2-201ENST00000591252 911 ntBASIC20■□□□□ 0.79
RHBDL3P58872 AL096865.1-201ENST00000606796 927 ntBASIC20■□□□□ 0.79
RHBDL3P58872 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RHBDL3P58872 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RHBDL3P58872 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20■□□□□ 0.79
RHBDL3P58872 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RHBDL3P58872 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
RHBDL3P58872 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RHBDL3P58872 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20■□□□□ 0.79
RHBDL3P58872 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20■□□□□ 0.79
RHBDL3P58872 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RHBDL3P58872 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20■□□□□ 0.79
RHBDL3P58872 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RHBDL3P58872 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.99■□□□□ 0.79
RHBDL3P58872 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RHBDL3P58872 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RHBDL3P58872 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RHBDL3P58872 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.99■□□□□ 0.79
RHBDL3P58872 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RHBDL3P58872 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RHBDL3P58872 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RHBDL3P58872 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RHBDL3P58872 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
RHBDL3P58872 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RHBDL3P58872 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.99■□□□□ 0.79
RHBDL3P58872 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.99■□□□□ 0.79
RHBDL3P58872 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RHBDL3P58872 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RHBDL3P58872 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RHBDL3P58872 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.99■□□□□ 0.79
RHBDL3P58872 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.99■□□□□ 0.79
RHBDL3P58872 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.99■□□□□ 0.79
RHBDL3P58872 AC011467.4-201ENST00000594891 528 ntBASIC19.99■□□□□ 0.79
RHBDL3P58872 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.99■□□□□ 0.79
RHBDL3P58872 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.98■□□□□ 0.79
RHBDL3P58872 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
RHBDL3P58872 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RHBDL3P58872 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RHBDL3P58872 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.98■□□□□ 0.79
RHBDL3P58872 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.98■□□□□ 0.79
RHBDL3P58872 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.98■□□□□ 0.79
RHBDL3P58872 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.98■□□□□ 0.79
RHBDL3P58872 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.98■□□□□ 0.79
RHBDL3P58872 CNN2P2-201ENST00000443536 909 ntBASIC19.98■□□□□ 0.79
RHBDL3P58872 CNN2P3-201ENST00000450201 906 ntBASIC19.98■□□□□ 0.79
RHBDL3P58872 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.98■□□□□ 0.79
RHBDL3P58872 AC067863.1-201ENST00000494933 530 ntBASIC19.98■□□□□ 0.79
RHBDL3P58872 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.98■□□□□ 0.79
RHBDL3P58872 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.98■□□□□ 0.79
RHBDL3P58872 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.98■□□□□ 0.79
RHBDL3P58872 AL136317.3-201ENST00000618497 906 ntBASIC19.98■□□□□ 0.79
RHBDL3P58872 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.98■□□□□ 0.79
RHBDL3P58872 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
RHBDL3P58872 AC008677.1-201ENST00000519230 1561 ntBASIC19.98■□□□□ 0.79
RHBDL3P58872 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.98■□□□□ 0.79
RHBDL3P58872 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.98■□□□□ 0.79
RHBDL3P58872 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHBDL3P58872 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RHBDL3P58872 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RHBDL3P58872 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RHBDL3P58872 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RHBDL3P58872 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RHBDL3P58872 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RHBDL3P58872 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.97■□□□□ 0.79
RHBDL3P58872 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.97■□□□□ 0.79
RHBDL3P58872 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RHBDL3P58872 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RHBDL3P58872 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
RHBDL3P58872 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.97■□□□□ 0.79
RHBDL3P58872 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.97■□□□□ 0.79
RHBDL3P58872 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.97■□□□□ 0.79
RHBDL3P58872 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.97■□□□□ 0.79
RHBDL3P58872 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.97■□□□□ 0.79
RHBDL3P58872 AC092364.2-202ENST00000597012 1073 ntBASIC19.97■□□□□ 0.79
RHBDL3P58872 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RHBDL3P58872 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms