Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPAP53621 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
COPAP53621 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPAP53621 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.64■□□□□ 0.41
COPAP53621 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPAP53621 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
COPAP53621 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPAP53621 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPAP53621 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPAP53621 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPAP53621 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.64■□□□□ 0.41
COPAP53621 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPAP53621 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPAP53621 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
COPAP53621 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPAP53621 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
COPAP53621 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPAP53621 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
COPAP53621 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPAP53621 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPAP53621 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPAP53621 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.63■□□□□ 0.41
COPAP53621 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPAP53621 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.63■□□□□ 0.41
COPAP53621 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPAP53621 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.63■□□□□ 0.41
COPAP53621 AC023274.1-201ENST00000418278 595 ntBASIC17.63■□□□□ 0.41
COPAP53621 AC004832.2-201ENST00000426397 482 ntBASIC17.63■□□□□ 0.41
COPAP53621 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.63■□□□□ 0.41
COPAP53621 KRT18P2-201ENST00000447938 1258 ntBASIC17.63■□□□□ 0.41
COPAP53621 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
COPAP53621 AC112482.1-201ENST00000492080 688 ntBASIC17.63■□□□□ 0.41
COPAP53621 STK19B-204ENST00000512515 211 ntBASIC17.63■□□□□ 0.41
COPAP53621 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.63■□□□□ 0.41
COPAP53621 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.63■□□□□ 0.41
COPAP53621 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPAP53621 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPAP53621 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.63■□□□□ 0.41
COPAP53621 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.63■□□□□ 0.41
COPAP53621 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPAP53621 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COPAP53621 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.63■□□□□ 0.41
COPAP53621 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPAP53621 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COPAP53621 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPAP53621 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPAP53621 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.62■□□□□ 0.41
COPAP53621 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.62■□□□□ 0.41
COPAP53621 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.62■□□□□ 0.41
COPAP53621 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPAP53621 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.62■□□□□ 0.41
COPAP53621 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPAP53621 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPAP53621 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.62■□□□□ 0.41
COPAP53621 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
COPAP53621 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
COPAP53621 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.62■□□□□ 0.41
COPAP53621 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPAP53621 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
COPAP53621 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.62■□□□□ 0.41
COPAP53621 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPAP53621 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.62■□□□□ 0.41
COPAP53621 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.62■□□□□ 0.41
COPAP53621 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.62■□□□□ 0.41
COPAP53621 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.62■□□□□ 0.41
COPAP53621 AL691403.2-201ENST00000618460 490 ntBASIC17.62■□□□□ 0.41
COPAP53621 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPAP53621 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
COPAP53621 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPAP53621 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
COPAP53621 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPAP53621 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.62■□□□□ 0.41
COPAP53621 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPAP53621 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.62■□□□□ 0.41
COPAP53621 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPAP53621 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPAP53621 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPAP53621 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPAP53621 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
COPAP53621 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
COPAP53621 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.61■□□□□ 0.41
COPAP53621 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPAP53621 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPAP53621 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.61■□□□□ 0.41
COPAP53621 DNAJB3-201ENST00000446806 729 ntBASIC17.61■□□□□ 0.41
COPAP53621 AC108073.2-201ENST00000464002 357 ntBASIC17.61■□□□□ 0.41
COPAP53621 RPS15P9-201ENST00000494093 319 ntBASIC17.61■□□□□ 0.41
COPAP53621 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.61■□□□□ 0.41
COPAP53621 AC002347.1-201ENST00000569543 541 ntBASIC17.61■□□□□ 0.41
COPAP53621 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.61■□□□□ 0.41
COPAP53621 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
COPAP53621 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPAP53621 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPAP53621 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.61■□□□□ 0.41
COPAP53621 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.61■□□□□ 0.41
COPAP53621 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.61■□□□□ 0.41
COPAP53621 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.61■□□□□ 0.41
COPAP53621 AC009336.1-201ENST00000608941 1553 ntBASIC17.61■□□□□ 0.41
COPAP53621 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
COPAP53621 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms