Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL079307.3-201ENST00000556114 283 ntBASIC28.73■■■□□ 2.19
CUX2O14529 AC023310.3-201ENST00000557027 670 ntBASIC28.73■■■□□ 2.19
CUX2O14529 AC100756.1-201ENST00000562736 682 ntBASIC28.73■■■□□ 2.19
CUX2O14529 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC28.73■■■□□ 2.19
CUX2O14529 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC28.73■■■□□ 2.19
CUX2O14529 AC138749.3-201ENST00000567691 622 ntBASIC28.73■■■□□ 2.19
CUX2O14529 HCG18-245ENST00000602550 559 ntTSL 4 BASIC28.73■■■□□ 2.19
CUX2O14529 AC116165.1-201ENST00000611806 668 ntBASIC28.73■■■□□ 2.19
CUX2O14529 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC28.73■■■□□ 2.19
CUX2O14529 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
CUX2O14529 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC28.73■■■□□ 2.19
CUX2O14529 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CUX2O14529 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
CUX2O14529 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
CUX2O14529 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC28.73■■■□□ 2.19
CUX2O14529 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC28.72■■■□□ 2.19
CUX2O14529 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CUX2O14529 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CUX2O14529 NUS1P3-201ENST00000423502 862 ntBASIC28.72■■■□□ 2.19
CUX2O14529 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC28.72■■■□□ 2.19
CUX2O14529 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC28.72■■■□□ 2.19
CUX2O14529 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC28.72■■■□□ 2.19
CUX2O14529 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC28.72■■■□□ 2.19
CUX2O14529 AC128714.1-201ENST00000637035 887 ntBASIC28.72■■■□□ 2.19
CUX2O14529 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CUX2O14529 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
CUX2O14529 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
CUX2O14529 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC28.72■■■□□ 2.19
CUX2O14529 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC28.72■■■□□ 2.19
CUX2O14529 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC28.72■■■□□ 2.19
CUX2O14529 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC28.72■■■□□ 2.19
CUX2O14529 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CUX2O14529 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CUX2O14529 AC104457.1-201ENST00000401024 814 ntBASIC28.72■■■□□ 2.19
CUX2O14529 LBH-202ENST00000401506 485 ntTSL 3 BASIC28.72■■■□□ 2.19
CUX2O14529 PP14571-201ENST00000404327 934 ntTSL 2 BASIC28.72■■■□□ 2.19
CUX2O14529 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC28.72■■■□□ 2.19
CUX2O14529 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC28.72■■■□□ 2.19
CUX2O14529 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC28.72■■■□□ 2.19
CUX2O14529 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC28.72■■■□□ 2.19
CUX2O14529 SPCS2P2-201ENST00000603270 608 ntBASIC28.72■■■□□ 2.19
CUX2O14529 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CUX2O14529 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CUX2O14529 AP000997.3-201ENST00000623333 2250 ntBASIC28.71■■■□□ 2.19
CUX2O14529 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CUX2O14529 AC046185.3-201ENST00000623228 1824 ntBASIC28.71■■■□□ 2.19
CUX2O14529 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC28.71■■■□□ 2.19
CUX2O14529 WIZP1-201ENST00000531444 2299 ntBASIC28.71■■■□□ 2.19
CUX2O14529 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC28.71■■■□□ 2.19
CUX2O14529 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC28.71■■■□□ 2.19
CUX2O14529 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC28.71■■■□□ 2.19
CUX2O14529 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC28.71■■■□□ 2.19
CUX2O14529 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC28.71■■■□□ 2.19
CUX2O14529 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC28.71■■■□□ 2.19
CUX2O14529 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC28.71■■■□□ 2.19
CUX2O14529 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CUX2O14529 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC28.71■■■□□ 2.19
CUX2O14529 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CUX2O14529 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC28.71■■■□□ 2.19
CUX2O14529 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC28.71■■■□□ 2.19
CUX2O14529 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CUX2O14529 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CUX2O14529 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
CUX2O14529 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC28.7■■■□□ 2.18
CUX2O14529 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CUX2O14529 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CUX2O14529 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CUX2O14529 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC28.7■■■□□ 2.18
CUX2O14529 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
CUX2O14529 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC28.7■■■□□ 2.18
CUX2O14529 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC28.7■■■□□ 2.18
CUX2O14529 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CUX2O14529 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
CUX2O14529 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CUX2O14529 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC28.7■■■□□ 2.18
CUX2O14529 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC28.69■■■□□ 2.18
CUX2O14529 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC28.69■■■□□ 2.18
CUX2O14529 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC28.69■■■□□ 2.18
CUX2O14529 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC28.69■■■□□ 2.18
CUX2O14529 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC28.69■■■□□ 2.18
CUX2O14529 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC28.69■■■□□ 2.18
CUX2O14529 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CUX2O14529 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CUX2O14529 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CUX2O14529 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
CUX2O14529 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
CUX2O14529 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC28.69■■■□□ 2.18
CUX2O14529 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
CUX2O14529 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC28.69■■■□□ 2.18
CUX2O14529 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CUX2O14529 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CUX2O14529 LOX-206ENST00000639739 1626 ntTSL 5 BASIC28.68■■■□□ 2.18
CUX2O14529 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CUX2O14529 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CUX2O14529 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC28.68■■■□□ 2.18
CUX2O14529 FTH1-202ENST00000526640 786 ntTSL 2 BASIC28.68■■■□□ 2.18
CUX2O14529 RIT1-205ENST00000539040 919 ntTSL 2 BASIC28.68■■■□□ 2.18
CUX2O14529 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC28.68■■■□□ 2.18
CUX2O14529 AC044860.1-202ENST00000559481 777 ntBASIC28.68■■■□□ 2.18
CUX2O14529 APRT-204ENST00000563655 709 ntTSL 5 BASIC28.68■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms