Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 CRYGEP-201ENST00000412192 528 ntBASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 AC211486.1-202ENST00000416371 468 ntBASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 RPS8P6-201ENST00000426177 609 ntBASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 PRSS29P-201ENST00000440800 595 ntBASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 KRT18P2-201ENST00000447938 1258 ntBASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 AC211476.1-201ENST00000503899 468 ntBASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 IGHV3-65-201ENST00000523210 341 ntBASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 AC008667.4-201ENST00000607370 168 ntBASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGA3Q9Y5H0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 AC006504.4-201ENST00000592118 1568 ntBASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 KLF4P1-201ENST00000412782 1185 ntBASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 VN2R19P-201ENST00000442399 1052 ntBASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 AC116407.2-201ENST00000613639 860 ntBASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGA3Q9Y5H0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGA3Q9Y5H0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.64■□□□□ 0.26
PCDHGA3Q9Y5H0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGA3Q9Y5H0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 PP12613-201ENST00000424958 2230 ntBASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 DNAJB3-202ENST00000449667 1266 ntBASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 YBX1P5-201ENST00000509441 847 ntBASIC16.64■□□□□ 0.25
PCDHGA3Q9Y5H0 AC005829.1-201ENST00000570002 483 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms