Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 AC060766.4-201ENST00000592117 537 ntBASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 MTND3P19-201ENST00000603825 345 ntBASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 AC020922.4-201ENST00000621389 339 ntBASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 AC022898.2-201ENST00000616822 1312 ntBASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 NBPF22P-202ENST00000590707 1580 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 FP325331.1-202ENST00000623531 1380 ntBASIC10.77□□□□□ -0.69
KRTAP3-3Q9BYR6 AC124017.1-202ENST00000506950 1616 ntTSL 2 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AC099654.3-201ENST00000447087 1546 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 TRAF3IP2-206ENST00000368735 903 ntTSL 2 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 SAT1-202ENST00000379253 909 ntTSL 2 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 DNAJA1P3-201ENST00000399417 1194 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 NFYAP1-201ENST00000431953 972 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 NPM1P17-201ENST00000479221 602 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 OR7E100P-201ENST00000489105 1015 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AC091951.2-201ENST00000500762 203 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 PPM1AP1-201ENST00000502740 1135 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AC010374.1-201ENST00000503762 1237 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AC134698.1-201ENST00000511619 643 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AC025174.1-201ENST00000511758 295 ntTSL 3 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 Y_RNA.695-201ENST00000516715 107 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 RNU6-794P-201ENST00000517261 64 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 COX7B2-204ENST00000543208 587 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AC087482.1-202ENST00000558071 903 ntTSL 5 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AC012414.2-201ENST00000559474 187 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 MIR4508-201ENST00000584178 70 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AC016629.3-201ENST00000596029 519 ntTSL 3 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AL157392.5-201ENST00000601460 1204 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AL031601.1-201ENST00000605702 394 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AC090970.3-201ENST00000612566 866 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 MTND5P11-201ENST00000511037 1812 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 AL603865.1-201ENST00000403062 1348 ntBASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
KRTAP3-3Q9BYR6 SRI-204ENST00000431660 1418 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 HSPD1P11-201ENST00000508643 1702 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms