Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 AC139887.3-201ENST00000568585 713 ntBASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 MIR7706-201ENST00000613747 67 ntBASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 BX640515.1-201ENST00000617215 977 ntBASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 FAM215A-202ENST00000632077 792 ntBASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 AL022326.1-202ENST00000641533 845 ntBASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 LINC00304-203ENST00000565008 1864 ntBASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 AL355312.1-201ENST00000407115 2176 ntBASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 AL020989.1-201ENST00000422979 469 ntBASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 RNA5SP419-201ENST00000515908 135 ntBASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 AC025062.2-201ENST00000605477 670 ntBASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 AL049757.1-201ENST00000616842 1596 ntBASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF1Q9BSM1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 AC243591.1-201ENST00000452967 1364 ntBASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 SPDYE21P-201ENST00000413323 827 ntBASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 AC092910.1-201ENST00000482027 1129 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms