Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC092919.2-201ENST00000623631 1645 ntBASIC19.97■□□□□ 0.79
TRIM47Q96LD4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 CXCL1P1-201ENST00000502804 216 ntBASIC19.96■□□□□ 0.79
TRIM47Q96LD4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM47Q96LD4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 AC093214.1-201ENST00000511688 1107 ntBASIC19.95■□□□□ 0.78
TRIM47Q96LD4 DUTP2-201ENST00000519164 463 ntBASIC19.95■□□□□ 0.78
TRIM47Q96LD4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 AC109462.3-201ENST00000573934 613 ntBASIC19.95■□□□□ 0.78
TRIM47Q96LD4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM47Q96LD4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 LINC00982-205ENST00000420957 435 ntBASIC19.94■□□□□ 0.78
TRIM47Q96LD4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 ADH5P3-201ENST00000433842 1137 ntBASIC19.94■□□□□ 0.78
TRIM47Q96LD4 DDX43P3-201ENST00000441064 443 ntBASIC19.94■□□□□ 0.78
TRIM47Q96LD4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 STK25P1-201ENST00000585406 838 ntBASIC19.94■□□□□ 0.78
TRIM47Q96LD4 AC015911.4-201ENST00000588022 1070 ntBASIC19.94■□□□□ 0.78
TRIM47Q96LD4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms