Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ATP2A3Q93084 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A3Q93084 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A3Q93084 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2A3Q93084 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A3Q93084 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A3Q93084 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A3Q93084 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A3Q93084 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A3Q93084 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A3Q93084 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2A3Q93084 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ATP2A3Q93084 AC141586.5-201ENST00000624546 2050 ntBASIC18.02■□□□□ 0.48
ATP2A3Q93084 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A3Q93084 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A3Q93084 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A3Q93084 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A3Q93084 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.02■□□□□ 0.48
ATP2A3Q93084 AC023274.1-201ENST00000418278 595 ntBASIC18.02■□□□□ 0.48
ATP2A3Q93084 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ATP2A3Q93084 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.02■□□□□ 0.48
ATP2A3Q93084 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A3Q93084 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.02■□□□□ 0.48
ATP2A3Q93084 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2A3Q93084 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.02■□□□□ 0.48
ATP2A3Q93084 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2A3Q93084 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ATP2A3Q93084 MTDHP5-201ENST00000598980 586 ntBASIC18.02■□□□□ 0.48
ATP2A3Q93084 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ATP2A3Q93084 AC055717.3-201ENST00000622967 595 ntBASIC18.02■□□□□ 0.48
ATP2A3Q93084 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.02■□□□□ 0.48
ATP2A3Q93084 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A3Q93084 AC079781.4-201ENST00000641908 219 ntBASIC18.02■□□□□ 0.48
ATP2A3Q93084 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
ATP2A3Q93084 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2A3Q93084 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2A3Q93084 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
ATP2A3Q93084 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2A3Q93084 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
ATP2A3Q93084 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A3Q93084 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A3Q93084 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A3Q93084 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
ATP2A3Q93084 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ATP2A3Q93084 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A3Q93084 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A3Q93084 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP2A3Q93084 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP2A3Q93084 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A3Q93084 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2A3Q93084 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2A3Q93084 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A3Q93084 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A3Q93084 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A3Q93084 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A3Q93084 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP2A3Q93084 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2A3Q93084 CRYGEP-201ENST00000412192 528 ntBASIC18.01■□□□□ 0.47
ATP2A3Q93084 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2A3Q93084 AC108073.2-201ENST00000464002 357 ntBASIC18.01■□□□□ 0.47
ATP2A3Q93084 AC112482.1-201ENST00000492080 688 ntBASIC18.01■□□□□ 0.47
ATP2A3Q93084 RPS15P9-201ENST00000494093 319 ntBASIC18.01■□□□□ 0.47
ATP2A3Q93084 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A3Q93084 MIR4751-201ENST00000578027 74 ntBASIC18.01■□□□□ 0.47
ATP2A3Q93084 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP2A3Q93084 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2A3Q93084 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
ATP2A3Q93084 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A3Q93084 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2A3Q93084 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A3Q93084 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ATP2A3Q93084 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A3Q93084 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A3Q93084 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2A3Q93084 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2A3Q93084 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
ATP2A3Q93084 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18■□□□□ 0.47
ATP2A3Q93084 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2A3Q93084 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2A3Q93084 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18■□□□□ 0.47
ATP2A3Q93084 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ATP2A3Q93084 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ATP2A3Q93084 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18■□□□□ 0.47
ATP2A3Q93084 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18■□□□□ 0.47
ATP2A3Q93084 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2A3Q93084 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2A3Q93084 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2A3Q93084 MYCLP1-201ENST00000372451 1075 ntBASIC18■□□□□ 0.47
ATP2A3Q93084 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2A3Q93084 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18■□□□□ 0.47
ATP2A3Q93084 COA5-202ENST00000409997 557 ntTSL 4 BASIC18■□□□□ 0.47
ATP2A3Q93084 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18■□□□□ 0.47
ATP2A3Q93084 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18■□□□□ 0.47
ATP2A3Q93084 AC002558.1-201ENST00000488906 803 ntBASIC18■□□□□ 0.47
ATP2A3Q93084 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18■□□□□ 0.47
ATP2A3Q93084 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18■□□□□ 0.47
ATP2A3Q93084 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP2A3Q93084 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18■□□□□ 0.47
ATP2A3Q93084 AC008667.4-201ENST00000607370 168 ntBASIC18■□□□□ 0.47
ATP2A3Q93084 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms