Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.4■□□□□ 0.22
EPHA4P54764 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
EPHA4P54764 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
EPHA4P54764 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.4■□□□□ 0.22
EPHA4P54764 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.4■□□□□ 0.22
EPHA4P54764 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.4■□□□□ 0.22
EPHA4P54764 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.4■□□□□ 0.22
EPHA4P54764 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPHA4P54764 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPHA4P54764 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPHA4P54764 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
EPHA4P54764 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.4■□□□□ 0.22
EPHA4P54764 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPHA4P54764 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPHA4P54764 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPHA4P54764 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPHA4P54764 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPHA4P54764 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPHA4P54764 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
EPHA4P54764 AC116353.5-201ENST00000638148 1699 ntBASIC16.4■□□□□ 0.22
EPHA4P54764 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPHA4P54764 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.4■□□□□ 0.22
EPHA4P54764 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.4■□□□□ 0.22
EPHA4P54764 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
EPHA4P54764 AC134043.2-201ENST00000624206 2238 ntBASIC16.39■□□□□ 0.22
EPHA4P54764 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
EPHA4P54764 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
EPHA4P54764 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.39■□□□□ 0.21
EPHA4P54764 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
EPHA4P54764 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.39■□□□□ 0.21
EPHA4P54764 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
EPHA4P54764 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
EPHA4P54764 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.39■□□□□ 0.21
EPHA4P54764 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.39■□□□□ 0.21
EPHA4P54764 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.39■□□□□ 0.21
EPHA4P54764 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.39■□□□□ 0.21
EPHA4P54764 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.39■□□□□ 0.21
EPHA4P54764 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 AL353732.1-201ENST00000569618 1459 ntBASIC16.39■□□□□ 0.21
EPHA4P54764 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.39■□□□□ 0.21
EPHA4P54764 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.39■□□□□ 0.21
EPHA4P54764 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 PKD1P1-201ENST00000458669 6805 ntBASIC16.39■□□□□ 0.21
EPHA4P54764 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
EPHA4P54764 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.39■□□□□ 0.21
EPHA4P54764 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.39■□□□□ 0.21
EPHA4P54764 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.39■□□□□ 0.21
EPHA4P54764 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.39■□□□□ 0.21
EPHA4P54764 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.39■□□□□ 0.21
EPHA4P54764 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
EPHA4P54764 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA4P54764 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA4P54764 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA4P54764 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.38■□□□□ 0.21
EPHA4P54764 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA4P54764 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA4P54764 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
EPHA4P54764 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA4P54764 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.38■□□□□ 0.21
EPHA4P54764 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA4P54764 AL121761.2-201ENST00000598007 1648 ntBASIC16.38■□□□□ 0.21
EPHA4P54764 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
EPHA4P54764 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA4P54764 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA4P54764 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
EPHA4P54764 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.38■□□□□ 0.21
EPHA4P54764 SLC25A1P3-201ENST00000395415 828 ntBASIC16.38■□□□□ 0.21
EPHA4P54764 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.38■□□□□ 0.21
EPHA4P54764 HCG4-201ENST00000418983 998 ntBASIC16.38■□□□□ 0.21
EPHA4P54764 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA4P54764 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA4P54764 AC091167.2-201ENST00000579581 588 ntBASIC16.38■□□□□ 0.21
EPHA4P54764 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.38■□□□□ 0.21
EPHA4P54764 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
EPHA4P54764 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
EPHA4P54764 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms