Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.7■□□□□ 0.1
SHC1P29353 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.7■□□□□ 0.1
SHC1P29353 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.7■□□□□ 0.1
SHC1P29353 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.7■□□□□ 0.1
SHC1P29353 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.7■□□□□ 0.1
SHC1P29353 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.7■□□□□ 0.1
SHC1P29353 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.7■□□□□ 0.1
SHC1P29353 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
SHC1P29353 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHC1P29353 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SHC1P29353 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHC1P29353 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHC1P29353 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHC1P29353 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.7■□□□□ 0.1
SHC1P29353 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHC1P29353 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHC1P29353 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SHC1P29353 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHC1P29353 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.69■□□□□ 0.1
SHC1P29353 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.69■□□□□ 0.1
SHC1P29353 SIGLEC16-201ENST00000599858 1437 ntBASIC15.69■□□□□ 0.1
SHC1P29353 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.69■□□□□ 0.1
SHC1P29353 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.69■□□□□ 0.1
SHC1P29353 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.69■□□□□ 0.1
SHC1P29353 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SHC1P29353 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SHC1P29353 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.69■□□□□ 0.1
SHC1P29353 TPM4P1-201ENST00000436100 807 ntBASIC15.69■□□□□ 0.1
SHC1P29353 FAAHP1-202ENST00000446499 1238 ntBASIC15.69■□□□□ 0.1
SHC1P29353 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.69■□□□□ 0.1
SHC1P29353 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.69■□□□□ 0.1
SHC1P29353 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SHC1P29353 AC021087.4-201ENST00000563761 564 ntBASIC15.69■□□□□ 0.1
SHC1P29353 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.69■□□□□ 0.1
SHC1P29353 AL139288.1-201ENST00000623748 933 ntBASIC15.69■□□□□ 0.1
SHC1P29353 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.69■□□□□ 0.1
SHC1P29353 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.69■□□□□ 0.1
SHC1P29353 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SHC1P29353 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.69■□□□□ 0.1
SHC1P29353 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
SHC1P29353 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.69■□□□□ 0.1
SHC1P29353 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.69■□□□□ 0.1
SHC1P29353 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.69■□□□□ 0.1
SHC1P29353 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHC1P29353 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.68■□□□□ 0.1
SHC1P29353 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.68■□□□□ 0.1
SHC1P29353 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SHC1P29353 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SHC1P29353 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
SHC1P29353 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.68■□□□□ 0.1
SHC1P29353 AC009078.2-202ENST00000463353 338 ntBASIC15.68■□□□□ 0.1
SHC1P29353 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
SHC1P29353 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.68■□□□□ 0.1
SHC1P29353 AP002469.2-201ENST00000531724 424 ntBASIC15.68■□□□□ 0.1
SHC1P29353 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.68■□□□□ 0.1
SHC1P29353 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.68■□□□□ 0.1
SHC1P29353 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.68■□□□□ 0.1
SHC1P29353 AC148477.8-201ENST00000624298 468 ntBASIC15.68■□□□□ 0.1
SHC1P29353 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.68■□□□□ 0.1
SHC1P29353 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SHC1P29353 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SHC1P29353 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms