Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC005237.2-201ENST00000434368 219 ntBASIC17.22■□□□□ 0.35
RETP07949 AC007274.1-201ENST00000439805 662 ntBASIC17.22■□□□□ 0.35
RETP07949 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.22■□□□□ 0.35
RETP07949 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.22■□□□□ 0.35
RETP07949 FAM86C2P-203ENST00000528684 1004 ntBASIC17.22■□□□□ 0.35
RETP07949 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RETP07949 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.22■□□□□ 0.35
RETP07949 AL008721.1-201ENST00000609964 604 ntBASIC17.22■□□□□ 0.35
RETP07949 AC026120.1-201ENST00000611536 926 ntBASIC17.22■□□□□ 0.35
RETP07949 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RETP07949 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RETP07949 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RETP07949 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.22■□□□□ 0.35
RETP07949 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RETP07949 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RETP07949 AC006116.8-202ENST00000587620 1550 ntBASIC17.22■□□□□ 0.35
RETP07949 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RETP07949 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RETP07949 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RETP07949 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
RETP07949 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RETP07949 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.21■□□□□ 0.35
RETP07949 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.21■□□□□ 0.35
RETP07949 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.21■□□□□ 0.35
RETP07949 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RETP07949 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RETP07949 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RETP07949 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RETP07949 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RETP07949 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RETP07949 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.21■□□□□ 0.35
RETP07949 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RETP07949 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RETP07949 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RETP07949 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RETP07949 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RETP07949 MIR943-201ENST00000401286 94 ntBASIC17.21■□□□□ 0.35
RETP07949 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.21■□□□□ 0.35
RETP07949 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.21■□□□□ 0.35
RETP07949 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RETP07949 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.21■□□□□ 0.35
RETP07949 AL512356.2-201ENST00000546955 174 ntBASIC17.21■□□□□ 0.35
RETP07949 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.21■□□□□ 0.35
RETP07949 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.21■□□□□ 0.35
RETP07949 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.21■□□□□ 0.35
RETP07949 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RETP07949 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RETP07949 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RETP07949 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RETP07949 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RETP07949 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RETP07949 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RETP07949 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RETP07949 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
RETP07949 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RETP07949 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RETP07949 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RETP07949 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RETP07949 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 AC097637.2-201ENST00000624096 1997 ntBASIC17.2■□□□□ 0.34
RETP07949 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RETP07949 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.2■□□□□ 0.34
RETP07949 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.2■□□□□ 0.34
RETP07949 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
RETP07949 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.2■□□□□ 0.34
RETP07949 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.2■□□□□ 0.34
RETP07949 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.2■□□□□ 0.34
RETP07949 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.2■□□□□ 0.34
RETP07949 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RETP07949 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.2■□□□□ 0.34
RETP07949 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RETP07949 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.2■□□□□ 0.34
RETP07949 PI4KAP1-204ENST00000612579 1703 ntBASIC17.2■□□□□ 0.34
RETP07949 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.2■□□□□ 0.34
RETP07949 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.2■□□□□ 0.34
RETP07949 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RETP07949 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.2■□□□□ 0.34
RETP07949 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RETP07949 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.2■□□□□ 0.34
RETP07949 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RETP07949 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RETP07949 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms