Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF40O75150 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
RNF40O75150 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF40O75150 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF40O75150 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF40O75150 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF40O75150 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF40O75150 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF40O75150 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RNF40O75150 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF40O75150 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF40O75150 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF40O75150 PCDHB17P-201ENST00000539533 2393 ntBASIC18.5■□□□□ 0.55
RNF40O75150 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF40O75150 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF40O75150 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF40O75150 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF40O75150 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF40O75150 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF40O75150 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF40O75150 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF40O75150 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.5■□□□□ 0.55
RNF40O75150 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF40O75150 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF40O75150 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
RNF40O75150 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF40O75150 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF40O75150 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF40O75150 AL603756.1-201ENST00000606511 2163 ntBASIC18.49■□□□□ 0.55
RNF40O75150 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF40O75150 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
RNF40O75150 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RNF40O75150 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RNF40O75150 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
RNF40O75150 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RNF40O75150 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF40O75150 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
RNF40O75150 AC093909.1-201ENST00000504731 1122 ntBASIC18.49■□□□□ 0.55
RNF40O75150 AC113404.2-201ENST00000507884 177 ntBASIC18.49■□□□□ 0.55
RNF40O75150 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.49■□□□□ 0.55
RNF40O75150 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.49■□□□□ 0.55
RNF40O75150 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RNF40O75150 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RNF40O75150 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RNF40O75150 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RNF40O75150 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RNF40O75150 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RNF40O75150 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF40O75150 AC093010.1-201ENST00000473625 1624 ntBASIC18.49■□□□□ 0.55
RNF40O75150 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF40O75150 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF40O75150 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RNF40O75150 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF40O75150 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF40O75150 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF40O75150 AC009102.3-201ENST00000623118 1491 ntBASIC18.48■□□□□ 0.55
RNF40O75150 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF40O75150 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF40O75150 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF40O75150 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RNF40O75150 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF40O75150 RCN1P2-201ENST00000398357 915 ntBASIC18.48■□□□□ 0.55
RNF40O75150 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF40O75150 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF40O75150 KRT18P13-201ENST00000400056 1290 ntBASIC18.48■□□□□ 0.55
RNF40O75150 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF40O75150 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RNF40O75150 AC005336.2-201ENST00000593183 939 ntBASIC18.48■□□□□ 0.55
RNF40O75150 AC008687.5-201ENST00000593746 558 ntBASIC18.48■□□□□ 0.55
RNF40O75150 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.48■□□□□ 0.55
RNF40O75150 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF40O75150 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF40O75150 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF40O75150 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF40O75150 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF40O75150 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF40O75150 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF40O75150 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF40O75150 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF40O75150 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF40O75150 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF40O75150 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF40O75150 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms